| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4863 |
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| Symbol | |
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| ID | 4583424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 365603 |
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| End bp | 366295 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639772166 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_918619 |
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| Protein GI | 119387585 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.955169 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTCCTG GCAGCTGCGA GACGGCCATG TTCAACTATA CCTTCCAATG GAAGCAGGCG
ATGGCGCGGC TTCCGCAGAT GCTGGATGGC GCCGTCGTCA CCATGCAGGT GGCGATCCTG
TCGATGGTGC TGGGCATCCT GCTGGCGATC ATCCTGACCA TGTTCCGCCT GTCGGGCATC
CGCATCCTGT CCGCCGTCGC GAAGACCTGG GTCGAGATCG CGCGCAACAC CCCGGCGCTG
TTCCAGATCT ACATGGCGCA TTTCGGGCTG GGCAGCTTCG GCCTGCATCT GAGCCCGTTC
CTGTCGATCC TGATCGGCAT CACCTTCAAC AATGCCGGCT ACCTGACCGA GAATTTCCGC
GGCGCGCTGA AGGCCATCCC CGACACGCAG ACCCGCGCCG CCCGGTCGTT GGGCATGGGG
GCGGCGGGGG CGTTCCGTCA TGTCGTGCTG CCGCAGATGC TGCGCATCTC GTTCCTGCCG
ATGACGAACC AGATGGTCTG GGCGATCCTG ATGACCTCGC TGGGCGTCAC CGTGGGGATG
AATACCGACC TTTACGGCGT CACTCAGGAC CTGAATGCGC TGACCTTCCG CACGTTCGAG
CTGTTCGCCC TGGCCGCGGT GATCTTCTAC GCCATCACCA AGATCGTCAC CCTTGGCGCG
CGGCTGATCG CCGCCCGGCT GTTCCGGTAT TGA
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| Protein sequence | MLPGSCETAM FNYTFQWKQA MARLPQMLDG AVVTMQVAIL SMVLGILLAI ILTMFRLSGI
RILSAVAKTW VEIARNTPAL FQIYMAHFGL GSFGLHLSPF LSILIGITFN NAGYLTENFR
GALKAIPDTQ TRAARSLGMG AAGAFRHVVL PQMLRISFLP MTNQMVWAIL MTSLGVTVGM
NTDLYGVTQD LNALTFRTFE LFALAAVIFY AITKIVTLGA RLIAARLFRY
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