Gene Pden_4861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4861 
Symbol 
ID4583422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp364221 
End bp364946 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content64% 
IMG OID639772164 
ProductABC transporter related 
Protein accessionYP_918617 
Protein GI119387583 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.62154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAGA TCGAACATGT CCGCAAATCC TTTGGCCAGC TGGAGGTTCT GAAGGGCATC 
GACCTGACGG TCAGCAAGGG CGAGGTGGTC ACGATCATCG GCGGCTCGGG GTCGGGCAAG
TCGACGCTTC TGACCTGCAT CAACGGGCTG GAGCCGATCG ATTCCGGCCG CATCCTGATC
GACGGGACCG AGGTTCACGC GAAATCCACC GACCTCAACA AGCTGCGCCG CAAGGTCGGG
ATCGTGTTCC AGCAGTGGAA CGCCTTTCCG CACCTGACCG TGCTGGAAAA CGTCACCTTG
GCGCCCCGCA AGGTGCTGGG GATGGCAAGG GCCGAGGCCG AGGAGATCGC CGTTCGGCAA
CTGACCCATG TGGGGCTGGG CGACAAGCTC AAGACCTATC CGGGCCGGCT GTCGGGCGGC
CAGCAGCAGC GCATGGCGAT CGCCCGCGCG CTGGCCATGT CGCCCGAATA CATGCTGTTC
GACGAGGTGA CCTCGGCGCT TGACCCGCAA CTGGTGGGCG AGGTCCTGGA CACGCTGAAG
ATGCTGGCCC AAGAGGGCAT GACGATGATC CTGGTCACGC ATGAGATGGC CTTTGCGCGC
GACGTGTCGG ACCGGGTGGC CTTCTTCCAC CAGGGCGTCA TGGCCGAGAT CGGGCCGCCG
CAGCAGATCT TCGGCGACCC GCAGCATCCC GAGACGCGCA AGTTCCTGTC GAGCACCCGG
CAATGA
 
Protein sequence
MIEIEHVRKS FGQLEVLKGI DLTVSKGEVV TIIGGSGSGK STLLTCINGL EPIDSGRILI 
DGTEVHAKST DLNKLRRKVG IVFQQWNAFP HLTVLENVTL APRKVLGMAR AEAEEIAVRQ
LTHVGLGDKL KTYPGRLSGG QQQRMAIARA LAMSPEYMLF DEVTSALDPQ LVGEVLDTLK
MLAQEGMTMI LVTHEMAFAR DVSDRVAFFH QGVMAEIGPP QQIFGDPQHP ETRKFLSSTR
Q