Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4861 |
Symbol | |
ID | 4583422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 364221 |
End bp | 364946 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639772164 |
Product | ABC transporter related |
Protein accession | YP_918617 |
Protein GI | 119387583 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.62154 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAGA TCGAACATGT CCGCAAATCC TTTGGCCAGC TGGAGGTTCT GAAGGGCATC GACCTGACGG TCAGCAAGGG CGAGGTGGTC ACGATCATCG GCGGCTCGGG GTCGGGCAAG TCGACGCTTC TGACCTGCAT CAACGGGCTG GAGCCGATCG ATTCCGGCCG CATCCTGATC GACGGGACCG AGGTTCACGC GAAATCCACC GACCTCAACA AGCTGCGCCG CAAGGTCGGG ATCGTGTTCC AGCAGTGGAA CGCCTTTCCG CACCTGACCG TGCTGGAAAA CGTCACCTTG GCGCCCCGCA AGGTGCTGGG GATGGCAAGG GCCGAGGCCG AGGAGATCGC CGTTCGGCAA CTGACCCATG TGGGGCTGGG CGACAAGCTC AAGACCTATC CGGGCCGGCT GTCGGGCGGC CAGCAGCAGC GCATGGCGAT CGCCCGCGCG CTGGCCATGT CGCCCGAATA CATGCTGTTC GACGAGGTGA CCTCGGCGCT TGACCCGCAA CTGGTGGGCG AGGTCCTGGA CACGCTGAAG ATGCTGGCCC AAGAGGGCAT GACGATGATC CTGGTCACGC ATGAGATGGC CTTTGCGCGC GACGTGTCGG ACCGGGTGGC CTTCTTCCAC CAGGGCGTCA TGGCCGAGAT CGGGCCGCCG CAGCAGATCT TCGGCGACCC GCAGCATCCC GAGACGCGCA AGTTCCTGTC GAGCACCCGG CAATGA
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Protein sequence | MIEIEHVRKS FGQLEVLKGI DLTVSKGEVV TIIGGSGSGK STLLTCINGL EPIDSGRILI DGTEVHAKST DLNKLRRKVG IVFQQWNAFP HLTVLENVTL APRKVLGMAR AEAEEIAVRQ LTHVGLGDKL KTYPGRLSGG QQQRMAIARA LAMSPEYMLF DEVTSALDPQ LVGEVLDTLK MLAQEGMTMI LVTHEMAFAR DVSDRVAFFH QGVMAEIGPP QQIFGDPQHP ETRKFLSSTR Q
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