| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4857 |
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| Symbol | |
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| ID | 4583418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 359934 |
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| End bp | 361199 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639772160 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_918613 |
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| Protein GI | 119387579 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.454998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGACCT CAACCGCCTT TCTGGTCGTG ATGCTGGTGG GCGTGCCCAT CGGCCTGTGC
CTCTGCGTCG CGGCCATCGT CTATGTGCTG GCCAGCGGCA ACATGGTGCT GTTCCAAAGC
TATCCCTTGC AGATGTTCAA CGCGGTGGAC AGCTATGGCC TGATCGCCAT CCCGCTGTTC
GTCCTGATCG GAGAGATCAT GAACGCGGGC GGCATCACCA AGAAGATCGT CGACATGGCC
ATGGCCTTCG TCGGCTCGCT GCGCGGCGGG CTGGCCTATG TCAACGCCAT CGCGAACATG
TTCGTGGCCT CGATCCTCGG CTCCGCCACG GCGCAGGTGG CGATCATGTC GCAGATCATG
GTCCCCGAGA TGGAGAAAAA GGGCTACGAC AAGGACTTCT CTGCCGGGCT GACCGCCTAT
GGCGGGATGC TGGGGTCGAT CATGCCGCCC TCGGTCATGT TCGTGGTCTA CAGCGTCATG
GCGCAGGTCT CGGTATCGGA CATGCTGATG GCGGGGCTGG TGCCGGGGCT GATCCTGACC
GCGCTGTTCT GCGTGGTGAT CGCCATCATC GGCCATTGCC AGAAATTCCC GCGCAGCGAG
CCGCAGACGT TCAAGCAGCG CGCCGCCACG GTCTGGGCGG CGGTACCGTC GCTGTCGATC
CCCATCGTCA TCGTCGGCTC GATCTTTTCG GGTCTTGCCA GCGCGACCGA GGCCGGTGCC
GTCGGCGCGG TGATGTCGCT GCTCATCGGC CGCTTCTGGA CGAGGCGGCT GCGTTTCTCG
GACATGCCGG CGATCATGAC CCGGGCGGGG CTTTACTCGG CCATCGTGCT GTTCCTGGTC
GTGGCGGCGG GGGTGCTGTC CTGGATCCTC GTGTTCGGGC GCGTCCCGCA AGAGGTCGCC
GGCTGGATCC AGACCGTGGC CAAGGACCCG GTCACCTTCA TGCTGCTGGC CAACGTGATC
CTGCTGGTGA TCGGCACGGT GATCGACGGC ATTCCCGGCC TGATCATGAC GGTTCCGATC
CTGCTGCCGA TCGCCACCGA GGTCTATGGC ATCGACCCGC ATCATTTCGG CGTCGTCGTG
GTGATCAACC TGGTGCTGGG GCTGCTGTCG CCGCCGGTCG GCCTGTGCTT CTTCGTCGCC
GCCGCCGCGA CGGGGGCCAA TCCCGGGCGG ATGTTCATGG TGACCATGCC GTTCTTCCTG
ATCACCTGCG TCCTTCTGGT GATCCTGTCG GTGTTCCCGA CCATCTCGCT GATCTTCATC
GGATAA
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| Protein sequence | MLTSTAFLVV MLVGVPIGLC LCVAAIVYVL ASGNMVLFQS YPLQMFNAVD SYGLIAIPLF
VLIGEIMNAG GITKKIVDMA MAFVGSLRGG LAYVNAIANM FVASILGSAT AQVAIMSQIM
VPEMEKKGYD KDFSAGLTAY GGMLGSIMPP SVMFVVYSVM AQVSVSDMLM AGLVPGLILT
ALFCVVIAII GHCQKFPRSE PQTFKQRAAT VWAAVPSLSI PIVIVGSIFS GLASATEAGA
VGAVMSLLIG RFWTRRLRFS DMPAIMTRAG LYSAIVLFLV VAAGVLSWIL VFGRVPQEVA
GWIQTVAKDP VTFMLLANVI LLVIGTVIDG IPGLIMTVPI LLPIATEVYG IDPHHFGVVV
VINLVLGLLS PPVGLCFFVA AAATGANPGR MFMVTMPFFL ITCVLLVILS VFPTISLIFI
G
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