Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4843 |
Symbol | |
ID | 4583404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 342404 |
End bp | 343234 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639772146 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_918599 |
Protein GI | 119387565 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.967009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGCA AGACTTCCCC GACCCGACAG GCCGTCGTCA CCGTGGCGGC ATGGAGTATC GGTTTCCTGA TCTTCCTGCC GATCCTGTGG ACCGTCATCC TCAGCTTCAA GTCGGAAACA GACGCGATCC GCACGCCCTT GCAGGTGCTG TCGGCGCCCT GGACGACGGC GAGCTATGCC GAGGTGCAAG GCCGTTCGAA CTACGGTGCG CATTTCATGA ACTCGGTGAT CATCTCGCTG GGCTCGACGG TGCTGGCGTT GCTGGTCGCC ATCCCGGCGG CCTGGGCCAT GGCGTTCCAG CCCGGCCGGC GGACCAAGGA TCTGCTGATG TGGATGCTCT CCACCAAGAT GATGCCGGCC GTGGGCGTGC TGATCCCCAT CTATCTGATG TTCCGCGATT TCGGGCTGCT GGATACGCGC ATCGGGCTGA CGGTGGTGAT GACGCTGATC AACCTGCCGA TCGTGGTCTG GATGCTCTAC ACCTATTTTC GCGAGATCCC GTCCGAGATC CTGGAGGCGG CGCGGATGGA CGGCGCCAGC CTGACGAAAG AGATCGTCCA TGTGCTGACG CCGATGGCGG TTCCGGGCAT CGCCTCGACG CTGCTGCTGA ACGTCATCCT GGCTTGGAAC GAGGCGTTCT GGACGCTGCA GCTGACCACC TCCAAGGCGG CGCCGCTGAC GGCCTTCATC GCCAGCTATT CCTCGCCCGA GGGGCTTTTC TACGCGAAAC TGTCGGCGGC CTCGACCATG GCCATCGCAC CCATCCTGAT CCTTGGCTGG TTCAGCCAGA AGCAACTGGT CCGCGGCCTG ACCTTCGGCG CGGTGAAATG A
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Protein sequence | MARKTSPTRQ AVVTVAAWSI GFLIFLPILW TVILSFKSET DAIRTPLQVL SAPWTTASYA EVQGRSNYGA HFMNSVIISL GSTVLALLVA IPAAWAMAFQ PGRRTKDLLM WMLSTKMMPA VGVLIPIYLM FRDFGLLDTR IGLTVVMTLI NLPIVVWMLY TYFREIPSEI LEAARMDGAS LTKEIVHVLT PMAVPGIAST LLLNVILAWN EAFWTLQLTT SKAAPLTAFI ASYSSPEGLF YAKLSAASTM AIAPILILGW FSQKQLVRGL TFGAVK
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