Gene Pden_4843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4843 
Symbol 
ID4583404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp342404 
End bp343234 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content63% 
IMG OID639772146 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_918599 
Protein GI119387565 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.967009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA AGACTTCCCC GACCCGACAG GCCGTCGTCA CCGTGGCGGC ATGGAGTATC 
GGTTTCCTGA TCTTCCTGCC GATCCTGTGG ACCGTCATCC TCAGCTTCAA GTCGGAAACA
GACGCGATCC GCACGCCCTT GCAGGTGCTG TCGGCGCCCT GGACGACGGC GAGCTATGCC
GAGGTGCAAG GCCGTTCGAA CTACGGTGCG CATTTCATGA ACTCGGTGAT CATCTCGCTG
GGCTCGACGG TGCTGGCGTT GCTGGTCGCC ATCCCGGCGG CCTGGGCCAT GGCGTTCCAG
CCCGGCCGGC GGACCAAGGA TCTGCTGATG TGGATGCTCT CCACCAAGAT GATGCCGGCC
GTGGGCGTGC TGATCCCCAT CTATCTGATG TTCCGCGATT TCGGGCTGCT GGATACGCGC
ATCGGGCTGA CGGTGGTGAT GACGCTGATC AACCTGCCGA TCGTGGTCTG GATGCTCTAC
ACCTATTTTC GCGAGATCCC GTCCGAGATC CTGGAGGCGG CGCGGATGGA CGGCGCCAGC
CTGACGAAAG AGATCGTCCA TGTGCTGACG CCGATGGCGG TTCCGGGCAT CGCCTCGACG
CTGCTGCTGA ACGTCATCCT GGCTTGGAAC GAGGCGTTCT GGACGCTGCA GCTGACCACC
TCCAAGGCGG CGCCGCTGAC GGCCTTCATC GCCAGCTATT CCTCGCCCGA GGGGCTTTTC
TACGCGAAAC TGTCGGCGGC CTCGACCATG GCCATCGCAC CCATCCTGAT CCTTGGCTGG
TTCAGCCAGA AGCAACTGGT CCGCGGCCTG ACCTTCGGCG CGGTGAAATG A
 
Protein sequence
MARKTSPTRQ AVVTVAAWSI GFLIFLPILW TVILSFKSET DAIRTPLQVL SAPWTTASYA 
EVQGRSNYGA HFMNSVIISL GSTVLALLVA IPAAWAMAFQ PGRRTKDLLM WMLSTKMMPA
VGVLIPIYLM FRDFGLLDTR IGLTVVMTLI NLPIVVWMLY TYFREIPSEI LEAARMDGAS
LTKEIVHVLT PMAVPGIAST LLLNVILAWN EAFWTLQLTT SKAAPLTAFI ASYSSPEGLF
YAKLSAASTM AIAPILILGW FSQKQLVRGL TFGAVK