Gene Pden_4841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4841 
Symbol 
ID4583402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp340631 
End bp341401 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content68% 
IMG OID639772144 
Productsorbitol dehydrogenase 
Protein accessionYP_918597 
Protein GI119387563 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTGC AAGGCAAAAC CGCCCTGATC ACCGGCGCGG CCCGCGGCAT CGGGCTGGAA 
TTCGCCCGTG CCTATATCGC CGAGGGCGCC CGCGTCGCGC TGGCCGACAT CAATGCCGAC
GCCGTGCGCG CCGCCGTCGA AAGCCTTGGC CCGCAGGCCG TCGCCGTGCA GATGGACGTG
ACCCGGCAGG ACAGCATCGA CGCCGGATTC GCCGAGGTGA TCGGCACGTT CGGCCATCTG
GATATCCTGG TCAACAACGC CGCGCTGTTC ACCGCCGCGC CGGTCGAGGA GGTCACCCGC
GCCGATTACG ACCGTGTCAT GGCGGTGAAC ATGACCGGTG CCTTCTTCTG CATGCAGGCG
GCGGCGAAGC ACATGATCGC CCGCGGCAAG GGCGGCAAGA TCATCAACAT GGCATCTCAG
GCCGGCCGCC GGGGCGAGCC CTTGGTCGCG GTCTATTGCG CCAGCAAGGC CGCCGTCATC
AGCATGACCC AAAGCGCCGG CCTCGGCCTG ATCCGCCACG GCATCAACGT CAACGCCATC
GCCCCGGGCG TGGTGGATGG CGAGCACTGG GACATGGTGG ACGAGCATTT CGCCCGCTTC
GAGGGCCTGA AGCCGGGCGA GAAGAAAAAG CTGGTCGGCG CGGCCGTGCC CTTCGGCCGC
ATGGGCGTGG CCTCGGACCT GACCGGCATG GCGATCTTTC TTGCCACGGC CGAGGCCGAA
TACATCGTCG GCCAGACCTT CGGCGTCGAT GGCGGCAACT GGCTGGCCTG A
 
Protein sequence
MRLQGKTALI TGAARGIGLE FARAYIAEGA RVALADINAD AVRAAVESLG PQAVAVQMDV 
TRQDSIDAGF AEVIGTFGHL DILVNNAALF TAAPVEEVTR ADYDRVMAVN MTGAFFCMQA
AAKHMIARGK GGKIINMASQ AGRRGEPLVA VYCASKAAVI SMTQSAGLGL IRHGINVNAI
APGVVDGEHW DMVDEHFARF EGLKPGEKKK LVGAAVPFGR MGVASDLTGM AIFLATAEAE
YIVGQTFGVD GGNWLA