| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4836 |
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| Symbol | |
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| ID | 4583397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 336108 |
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| End bp | 337487 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639772139 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_918592 |
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| Protein GI | 119387558 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.539292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.780725 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCGG TCCGCACGAG GATTGCCAGC CGGGCACTGG TGCCGGGCGA CCGCCTGCCA
TCGGTTCGGG GGTTTGCCAG GACCATGGGC GTGTCGCCCT CGACGGTGGT CGAGGCCTAT
GCCCGCCTGG AAGCCGAAGG CGTCATCCGC GCCCGGCGCG GCTCGGGCTT CTATGTCACC
GGCGCCGATC TGCCGCCGAT GGCGCTGGCA GAGATGGGGC CGCGCCGCGA ACGCGATATC
GATCCTTTCT GGGTGTCGCG GCAGTCGCTC GATGCCGATC CCTCGGTCCT GAAGCCCGGC
TGCGGCTGGC TTCCGGCCGA CTGGATGCCG AATGCCGCGC TGCGGAAGGG GTTGCGGGCG
CTCGGCCGCG CCAATGACGC GCTGCTGTCG GATTACGGCG GCACCCGGGG CGCGATCGAG
CTGCGCCGCC TGCTGATCGC CCGCTTTGCC GATCAGGGCA TCAACGCGAC GGCGGACCAG
ATCCTGCTGA CGGGCTCGGG GACGCAGGCC ATCGACTTGA TCTGCCGGTT GCTTCTGCGT
CCGGGGGACG CGGTTCTGGT CGACGATCCC TGCTATTTCA ACTTCCACGC CTTGCTGCGC
GCCCATCAGG TGCGCATCGT CGGCACCCCC TTCACGCCTG CGGGACCGGA CATTGCCGCC
TTCGAGCAGG CGCTGATCGA CGAGAACCCG CGCCTCTACA TCACCAATTC CGCGCTGCAC
AACCCGACCG GCGCCAGCAT CTCGCCCCAG ATCGCGCATC GGGTGCTGAG CGCCGCCGCC
GCCCACGGGC TGACCATCGT CGAGGACGAC ATCTTCGCGG ATTTTGAGCC GACGCCGTCG
CCGCGCCTCG CCATCCTCGA CGGCCTCCAG CGGGTGATCA GGATCGGAAG CTTTTCCAAG
ACGCTCTCGG CCTCGGTGCG CTGCGGCTAT ATCGCGGCCC GGGCGGACTG GATCGAAAGC
CTGGTCGACC TGCAGGTCGC GACCAGTTTC GGCGGTCCCA GCCCGGTCTC GACCGAGCTG
ATCGCCGGCG TCCTGGCCGG GGGAAGCTAT CGCAGGCATA TGGACGATGT GCGCCAGCGG
CTGACGCATG CGAGGATCGA GGTGGCGGAA CGGTTGGCGC AGCTGGGCAT CGTTCCGTGG
ATCATGCCGC GGGGCGGCTT CTACCTTTGG TGCCGGCTGC CGGATGGATT GGACTCGGCG
GTCGTCGCCC GGCGCTGCAT GGAGCGCAAT GTCGTGCTTG CGCCCGGAAA CGCCTTCAGC
GCCTCGCAAT CGGCGGCGCC GTTCGTTCGC TTCAACGTGG CGCAGATGAG GGACCCACGG
ATCATCCCGA TCCTGGAGCG CGCGATGAGC GAAGGCGGGA CCGCTGCGGC AAGGGGTTGA
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| Protein sequence | MRAVRTRIAS RALVPGDRLP SVRGFARTMG VSPSTVVEAY ARLEAEGVIR ARRGSGFYVT
GADLPPMALA EMGPRRERDI DPFWVSRQSL DADPSVLKPG CGWLPADWMP NAALRKGLRA
LGRANDALLS DYGGTRGAIE LRRLLIARFA DQGINATADQ ILLTGSGTQA IDLICRLLLR
PGDAVLVDDP CYFNFHALLR AHQVRIVGTP FTPAGPDIAA FEQALIDENP RLYITNSALH
NPTGASISPQ IAHRVLSAAA AHGLTIVEDD IFADFEPTPS PRLAILDGLQ RVIRIGSFSK
TLSASVRCGY IAARADWIES LVDLQVATSF GGPSPVSTEL IAGVLAGGSY RRHMDDVRQR
LTHARIEVAE RLAQLGIVPW IMPRGGFYLW CRLPDGLDSA VVARRCMERN VVLAPGNAFS
ASQSAAPFVR FNVAQMRDPR IIPILERAMS EGGTAAARG
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