| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4833 |
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| Symbol | |
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| ID | 4583394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | + |
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| Start bp | 332445 |
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| End bp | 333902 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639772136 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_918589 |
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| Protein GI | 119387555 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCAGT TGCGCAAAGA CCCCGGCCAC CCGCCCGCCA TGGGCGCAAG GCAGATCTAC
GAGGCACTGC GCGAGCAGAT CGCCGGCGGC GTCTTCGGCG CCGCGGGGCG CTTGCCCTCG
TCCCGCGCGC TTGCCCATGA GCTGGGGGTG TCCAGGACCA CGGTCACCGC GGCCTATGAA
CAGCTCCTGG CCGAGGGTTT CATCGAGGTC CGGCAGGGCA GCCGCGCCCG CGTCGCCCCC
GATCTCGCCG AACCGGCGCG GCGAAAGGAC AGTCCCGGCC ATCCCCCGCC GGTCCGGCTG
TCGGCCTGGG GCGAGCGCAT CCGCCGGTTC CACCCCGCGC CCAGCCATGC CGGAAGCAGG
CTGCTGGCCG ATTTCCGCTA TGGCGACATG GCCGCCGGCG ATTTTCCCGC GACCCTCTGG
AAGCGCGCCA TGTCCGCCGC CCTGTCCCGG CAGCCCGAGC GCCTTAGCTA TGCCGACCCC
CGCGGCACGC CGCGGCTGCG CGCCGCGCTG CAAGGCTATC TCTGGCGGGC GCGGCAACTG
GTCTGCGAGC CGGACCAGAT CGTCATCGTC AACGGCTCGC AGCAGGGGCT CGACCTTTGC
GCGCGGCTGA TCCTCGATCC GGGCGATGCC TTCGCGATCG AGAACCCCTG CTATGCGATG
GCGCGCCAGG TGCTGGCCGG CACGGGGGCG ATGCCGGTGT CCATCCCGGT CGACGCGGCG
GGGCTGAGGA CCGAGGCGCT GGACAGGGTC CGGGCGCGCC TTGCCTATGT CACCCCCTCG
CACCAGTTTC CCATGGGCGG GGTGATGCCG GTCCGCCGCC GGCAGCAATT GCTGGACTGG
GCGCGGCAGA ATCATGCCTG GGTGATCGAG GACGACTACG ACAGCGAATA TCGCTTTGAC
ATCAATCCGG TGCCGGCGCT GCACGGGCTG GACGGCGGTG ATCGGGTGAT CTACCTGGGC
ACGCTTTCCA AGACCCTCTC GCCGCTCTTG CGCATCGGCT ATCTGGTGGT GCCGGCTGCG
CTGAACGAGG CGATGGCGGC AGCCAAGCGC CTGGCCGACC GGCATTCCCC GGTCGTGGAA
CAGGAGGCAC TGGCCGCGCT GATCGAAACC GGCGCCTATG AGCGCCATGT GCGCCGCATA
CGCCGGCTGA ATGGCGAGCG GCGCGCGACA CTCATCACCG CCTTGCGGCG CCATTTCGCG
GATCGGATCG TGATCGAGGG CGCCGATGCC GGGCTGCACC TGGTCATCTG GTTTCGCGAC
CTGCCCCGCA ACCGCGAGAC CGCACTGCTG GAGGGCGCCA AGGCCAAGGG CGTCGGGCTC
CATTCCATCT CCTGGCTCTA TGACGGCACG CCCGCCGACC GGCCCGATCA TGTCGGGCTG
GTCATGGGCT ATGCGGTGGA ACCGAAGCTG ATCGAGCGCG CGGTCAGGCT TCTGGCAGGG
GTCGTGGAAA CGCTGTGA
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| Protein sequence | MVQLRKDPGH PPAMGARQIY EALREQIAGG VFGAAGRLPS SRALAHELGV SRTTVTAAYE
QLLAEGFIEV RQGSRARVAP DLAEPARRKD SPGHPPPVRL SAWGERIRRF HPAPSHAGSR
LLADFRYGDM AAGDFPATLW KRAMSAALSR QPERLSYADP RGTPRLRAAL QGYLWRARQL
VCEPDQIVIV NGSQQGLDLC ARLILDPGDA FAIENPCYAM ARQVLAGTGA MPVSIPVDAA
GLRTEALDRV RARLAYVTPS HQFPMGGVMP VRRRQQLLDW ARQNHAWVIE DDYDSEYRFD
INPVPALHGL DGGDRVIYLG TLSKTLSPLL RIGYLVVPAA LNEAMAAAKR LADRHSPVVE
QEALAALIET GAYERHVRRI RRLNGERRAT LITALRRHFA DRIVIEGADA GLHLVIWFRD
LPRNRETALL EGAKAKGVGL HSISWLYDGT PADRPDHVGL VMGYAVEPKL IERAVRLLAG
VVETL
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