Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4820 |
Symbol | |
ID | 4583382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 317158 |
End bp | 318759 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639772124 |
Product | acyl-CoA synthetase |
Protein accession | YP_918577 |
Protein GI | 119387543 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.755365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.560915 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGC CCGCCACCGA ACCGGCCGGC GGCGTGATCC CGGTCTCGAC CCGGGTGATG AACCTTGCCA CCTTCCTGAC CCAGGCCGCG CGGCGCGACC CGGACGGCAT CGCGCTGGTC ATGGGCGAGG CGTGCTGGAC ATGGGCCGAG TTCGAGGCCC GCACCGACGC GCTGGCCCAT GCGCTGCAAA CCCGCTTCGG GCTGCAAAAG GGCGACCGGG TGATGTGCCA GTCGCAGAAC TGCATGGAGA TGATGCAGGC CATGTTCGCC ACCTGGCGCG CGGGCGGCAT CTGGGTGCCC GCGAACTTTC GCCAGACCCC CGAGGAAGTG GCCTGGCTGA CCGAAGCCTC GGGCGCGCGG CTGATGCTGT GCAACGCCGC CTTTCCCGAC CATGCGGCAG CCTGCGGAGT AACGACGCTG GCTTTCGGCG CGGCCGATTT CGGCCCCTCG GTGCAGGCGA TCACCGCCGA ACACCTGGGA AGCCGCCCGC AGGTCGCGGT GGTGGATCGC GACGATCCCT GCTGGTTCTT CTTCACCTCA GGCACCACGG GCCGGCCCAA GGCATCGGTG CTGACCCATG GCCAGATGGC CTTCGTGGTG ACGAACCACC TGGCGGACCT GATGCCGGGC CTGACGGGCG AGGATGCCTC GCTGGTGGTG GCGCCCTTGT CGCATGGCGC GGGGGTGCAT CAGCTCACGC AGGTGGCGCG CGGGGTGAAA ACGGTGCTGC TGCCGACCGA GCGTTTCGAC GTGGCGCAGG TCTGGGATCT GGTGCGGGAA TGGCGGGTGT CCACCATGTT CACCGTGCCG ACGATCCTGA AGCTGCTGGT CGAGCATCCC GCGACGGCAG GCGCCGACAC CTCGTCCTTG CGCTATGTGA TCTATGCCGG CGCGCCGATG TATCGGGTGG ACCAGCAAAG GGCGCTGCGC ACCTTGGGCA AGGTGCTTGT GCAATATTTC GGCCTGGGCG AATGCACCGG CAACATCACC GTGCTGCCTG CGCATCTGCA CGATGCCGAG GACGGCCCGA CCACCCGCAT CGGCACCTGC GGCCATGCCC GCACCGGGAT CGAGATCCAG ATCCAGGACG ATCAGGGCCG CGAACTGCCG CCCGGCCAGA CCGGAGAGAT CTGCGTGATC GGCCCCGCCG TCTTTGCCGG CTACTACCGG AACCCGCAGG CCAATGCGAA AGCCTTTCGC GACGGCTGGT TCCGCACCGG CGACCTGGGC CACATGGACG AGGCGGGGTT CCTGTATATC ACCGGGCGCG AGTCGGACAT GTTCATCTCG GGCGGCTCGA ACGTCTATCC GCGCGAGATC GAGGAAAAGA TCCTGACCCA TCCCGCCATT TCCGAGGTCG CGGTGCTGGG CGTCCCCGAT CCGCTTTGGG GCGAGGTCGG CTGGGCGATC TGCGTGGCAA GCGCGCCGGT GACCGAGGAG GAGCTGGCGG CGTTCGTCGC GCCCAAGCTT TCGCGCTACA AGCTGCCCAA GCGCTTCCTG TTCTGGGACG GCCTGCCGAA ATCGGCCTAT GGCAAGATCA CCAAGAAGAT GATCCGCGAA GAGCTGGAGG CGCGCGGCCT GCTGGAGCAG GCCCCGGCAT GA
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Protein sequence | MTEPATEPAG GVIPVSTRVM NLATFLTQAA RRDPDGIALV MGEACWTWAE FEARTDALAH ALQTRFGLQK GDRVMCQSQN CMEMMQAMFA TWRAGGIWVP ANFRQTPEEV AWLTEASGAR LMLCNAAFPD HAAACGVTTL AFGAADFGPS VQAITAEHLG SRPQVAVVDR DDPCWFFFTS GTTGRPKASV LTHGQMAFVV TNHLADLMPG LTGEDASLVV APLSHGAGVH QLTQVARGVK TVLLPTERFD VAQVWDLVRE WRVSTMFTVP TILKLLVEHP ATAGADTSSL RYVIYAGAPM YRVDQQRALR TLGKVLVQYF GLGECTGNIT VLPAHLHDAE DGPTTRIGTC GHARTGIEIQ IQDDQGRELP PGQTGEICVI GPAVFAGYYR NPQANAKAFR DGWFRTGDLG HMDEAGFLYI TGRESDMFIS GGSNVYPREI EEKILTHPAI SEVAVLGVPD PLWGEVGWAI CVASAPVTEE ELAAFVAPKL SRYKLPKRFL FWDGLPKSAY GKITKKMIRE ELEARGLLEQ APA
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