Gene Pden_4813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4813 
Symbol 
ID4583375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp308495 
End bp310867 
Gene Length2373 bp 
Protein Length790 aa 
Translation table11 
GC content67% 
IMG OID639772117 
Productpenicillin amidase 
Protein accessionYP_918570 
Protein GI119387536 
COG category[R] General function prediction only 
COG ID[COG2366] Protein related to penicillin acylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.911238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.40468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGGT CCTTGCTTGG CCGCCTGTTG CTGTCGGCCG GCCTTTCCGT CCTTGTTGCC 
TGTCCGGCGT TGGCCGATAC CCAGGTCGAG ATCGTGCGCG ACAACTGGGG CGTGCCGCAT
GTCTATGCCG ACGACGTGCA CGGCCTTTAC GCGGGCTTTG GCTACAGCGT GGCGCAGGAC
CGGCTGTTCC AGATGGAGAT GGCGCGGCGC TCGGTCCTGG GCGAGGTGGC CGAGGTGCTG
GGCATCGAGC GGCTGCCCTT CGACATCCAG ACCCGGGCCA TGTTCGACCA TGCCGATATC
CGCAGCCAGA TCGAGGCGCT GGCCCCGGAA GAGCGCGACA TCCTGCGCGG CTATGCGGCG
GGCTTCAACC TGTGGGTGGA CCGGGTTCTG GCCGATCCGG CCAAGCTGAT GCCCAGGCAG
TTCAACGATT TCGGCTTCAA GCCCCGGCGC TGGACCGAGT TCGACGTGGC GATGATCTAT
GTCGGGACCA TGGCCGGCCG CTTTTCGGGC TATAGCGCCG AACTGGGCAA TGCCAAGACG
CTGGCCGAGC TCGAGGCGCA ATTCGGCCCT GAAAAGGCGC GCGTGCTTTT CGACCAGATG
TTCTGGAACG AGGATCCGCT GGCCCCGACC ACTGTGCCCG AGGGCGGGCA ATACCAGCGC
AAGGCCGGGC TGGCCCCGTC CGAGCCCGGC CGCTTTGCCG AATTGCTGCA CGCGGGCGGG
CTGCCCGGCG ACGACGACCG CCCGCGCGCC AGTAATCTGT GGATCGCCGG GCCGCAAAAG
ACCACCGATG GCAGCACCAT CCTGATCAAC GGCCCGCAAT TCGGCAATTT CAACCCGTCC
TATGTCTTCA GCATCGGCCT GCATGGCGCC GGGTTCGACC TGACCGGCAA CACGCCCTTT
GCCGTGCCCA ACGTCCTTTT CGGCACCAAC GGCACCATCG CCTGGGGCGC CACGGCCGGG
CCGCGCGACG TGAACGACTA TTACCGGCTG GAGTTGAACC CCGAGAATCC GCGGCAATAC
CGCGCCCACG ACGGCTGGAA GGAGATGACG GCCCGCCGCG AGACCTTCCG CGTCAAGGGC
CAGCCCGAGG TCGAGACCAC GGTCTGGGAA AGCGAATACG GCGTGGTCGG CCAGATCGAT
CCAGGGACGG CGACCGCCTA TGCCTTCAAC CGCGCCTGGA AGGGACAGGA GATCTCGACG
CTCATGGCCT GGGTGGACTC GACCAAGGCG CAGAATTACG AAGAATGGCT GGACCAGGCG
GAAAAGGTCG CGACCACGAT CAACTGGTAT TACGCCGACC GGGACGGCAA TATCGGCTAT
GTCTCGCCCG GCCATGTCCC CGTCCGCGCC GAAGGCCACG ACCAGCGGCT TCCGGCCCGG
CCGGGCAAGG ACGACTGGCA GGGCGTGCGG CCCTTTGCCG ATGCGCCCAA GGGCTATAAC
CCCAGCCAGG GCTGGATCGC GAACTGGAAC AACCGCTCGG CCAGGGGCGA TGCCGCGAAT
TTCGAGGCCA CGCCCTGGGG CAGCGCCGAC CGGGTGGTCG AGATCATGGC GCGGCTCGAC
GCCAGGGAAA AGCTGACGCC CGACGAGATC TGGGACATCA ATCGCGAGAT CAGCTTTCTC
GACATCAACG CGCGCTATTT CCTGCCCTTC ATCCTTGATG CGGCCGAGGG CATCGACCCG
CAAAGCCAGC GCGCCGAACT GGTCGAGATC CTGCGCCATT GGGACGGGCA GCAGATCCGG
GCCGAGGACG GCCGCGCGAC CACCTCGGCC GTGGGGCTGT TCCAGGCCTG GCTGGACGTG
ATGGTCGAGG ACGTGCTGCG CGACGATAAT CCGGCGATCC CGCCGGCGAT CCTTTACAAC
CGCATCTCAC GCACCGCGCA GATGCTGCAC AACGCGCTGC TGGGCGAGCG GGCCGGCGTG
CCGCAGACCC ATGATTTCTT CAACGGCGCC GACGAGGCGG GCCGCAAGGA GATCATCCTT
GCCTCGCTGG ACAAGGCGGC CGCGCGGCTG GCCGACAGGT TCTGCAGCCA GGAGCCCGCC
GACTGGCGCA TCGAGATCAA GCAGCATGTG TTCGAGACCA GCAACTACCT GGGCATCCCT
CAGGCCGGCG AGGACGAGGT TCGCGCCATC GGCACCTCGA TGAACCGCGG CACCGAGAAC
AACCGGATCA CCTTTCGCGA AGGCAAGGCC GAGTTCTGCG CGGTGACGCC GCCGGGCCAG
AGCGGCTTCA TCAGCCCCTC GGGCGAGGCT TCGCCGCATT ACGAGGACCA GTTGGCGCTT
TACGAGGGTT TCGATTGCCG CCCGCAGGCG CTGACCCGCG ACGAGGTCGA AGCGGTGGCG
GTGTCGCGCG AAACCCTTGC CGTTCCGCGG TAG
 
Protein sequence
MSRSLLGRLL LSAGLSVLVA CPALADTQVE IVRDNWGVPH VYADDVHGLY AGFGYSVAQD 
RLFQMEMARR SVLGEVAEVL GIERLPFDIQ TRAMFDHADI RSQIEALAPE ERDILRGYAA
GFNLWVDRVL ADPAKLMPRQ FNDFGFKPRR WTEFDVAMIY VGTMAGRFSG YSAELGNAKT
LAELEAQFGP EKARVLFDQM FWNEDPLAPT TVPEGGQYQR KAGLAPSEPG RFAELLHAGG
LPGDDDRPRA SNLWIAGPQK TTDGSTILIN GPQFGNFNPS YVFSIGLHGA GFDLTGNTPF
AVPNVLFGTN GTIAWGATAG PRDVNDYYRL ELNPENPRQY RAHDGWKEMT ARRETFRVKG
QPEVETTVWE SEYGVVGQID PGTATAYAFN RAWKGQEIST LMAWVDSTKA QNYEEWLDQA
EKVATTINWY YADRDGNIGY VSPGHVPVRA EGHDQRLPAR PGKDDWQGVR PFADAPKGYN
PSQGWIANWN NRSARGDAAN FEATPWGSAD RVVEIMARLD AREKLTPDEI WDINREISFL
DINARYFLPF ILDAAEGIDP QSQRAELVEI LRHWDGQQIR AEDGRATTSA VGLFQAWLDV
MVEDVLRDDN PAIPPAILYN RISRTAQMLH NALLGERAGV PQTHDFFNGA DEAGRKEIIL
ASLDKAAARL ADRFCSQEPA DWRIEIKQHV FETSNYLGIP QAGEDEVRAI GTSMNRGTEN
NRITFREGKA EFCAVTPPGQ SGFISPSGEA SPHYEDQLAL YEGFDCRPQA LTRDEVEAVA
VSRETLAVPR