Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4813 |
Symbol | |
ID | 4583375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 308495 |
End bp | 310867 |
Gene Length | 2373 bp |
Protein Length | 790 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639772117 |
Product | penicillin amidase |
Protein accession | YP_918570 |
Protein GI | 119387536 |
COG category | [R] General function prediction only |
COG ID | [COG2366] Protein related to penicillin acylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.911238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.40468 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGGT CCTTGCTTGG CCGCCTGTTG CTGTCGGCCG GCCTTTCCGT CCTTGTTGCC TGTCCGGCGT TGGCCGATAC CCAGGTCGAG ATCGTGCGCG ACAACTGGGG CGTGCCGCAT GTCTATGCCG ACGACGTGCA CGGCCTTTAC GCGGGCTTTG GCTACAGCGT GGCGCAGGAC CGGCTGTTCC AGATGGAGAT GGCGCGGCGC TCGGTCCTGG GCGAGGTGGC CGAGGTGCTG GGCATCGAGC GGCTGCCCTT CGACATCCAG ACCCGGGCCA TGTTCGACCA TGCCGATATC CGCAGCCAGA TCGAGGCGCT GGCCCCGGAA GAGCGCGACA TCCTGCGCGG CTATGCGGCG GGCTTCAACC TGTGGGTGGA CCGGGTTCTG GCCGATCCGG CCAAGCTGAT GCCCAGGCAG TTCAACGATT TCGGCTTCAA GCCCCGGCGC TGGACCGAGT TCGACGTGGC GATGATCTAT GTCGGGACCA TGGCCGGCCG CTTTTCGGGC TATAGCGCCG AACTGGGCAA TGCCAAGACG CTGGCCGAGC TCGAGGCGCA ATTCGGCCCT GAAAAGGCGC GCGTGCTTTT CGACCAGATG TTCTGGAACG AGGATCCGCT GGCCCCGACC ACTGTGCCCG AGGGCGGGCA ATACCAGCGC AAGGCCGGGC TGGCCCCGTC CGAGCCCGGC CGCTTTGCCG AATTGCTGCA CGCGGGCGGG CTGCCCGGCG ACGACGACCG CCCGCGCGCC AGTAATCTGT GGATCGCCGG GCCGCAAAAG ACCACCGATG GCAGCACCAT CCTGATCAAC GGCCCGCAAT TCGGCAATTT CAACCCGTCC TATGTCTTCA GCATCGGCCT GCATGGCGCC GGGTTCGACC TGACCGGCAA CACGCCCTTT GCCGTGCCCA ACGTCCTTTT CGGCACCAAC GGCACCATCG CCTGGGGCGC CACGGCCGGG CCGCGCGACG TGAACGACTA TTACCGGCTG GAGTTGAACC CCGAGAATCC GCGGCAATAC CGCGCCCACG ACGGCTGGAA GGAGATGACG GCCCGCCGCG AGACCTTCCG CGTCAAGGGC CAGCCCGAGG TCGAGACCAC GGTCTGGGAA AGCGAATACG GCGTGGTCGG CCAGATCGAT CCAGGGACGG CGACCGCCTA TGCCTTCAAC CGCGCCTGGA AGGGACAGGA GATCTCGACG CTCATGGCCT GGGTGGACTC GACCAAGGCG CAGAATTACG AAGAATGGCT GGACCAGGCG GAAAAGGTCG CGACCACGAT CAACTGGTAT TACGCCGACC GGGACGGCAA TATCGGCTAT GTCTCGCCCG GCCATGTCCC CGTCCGCGCC GAAGGCCACG ACCAGCGGCT TCCGGCCCGG CCGGGCAAGG ACGACTGGCA GGGCGTGCGG CCCTTTGCCG ATGCGCCCAA GGGCTATAAC CCCAGCCAGG GCTGGATCGC GAACTGGAAC AACCGCTCGG CCAGGGGCGA TGCCGCGAAT TTCGAGGCCA CGCCCTGGGG CAGCGCCGAC CGGGTGGTCG AGATCATGGC GCGGCTCGAC GCCAGGGAAA AGCTGACGCC CGACGAGATC TGGGACATCA ATCGCGAGAT CAGCTTTCTC GACATCAACG CGCGCTATTT CCTGCCCTTC ATCCTTGATG CGGCCGAGGG CATCGACCCG CAAAGCCAGC GCGCCGAACT GGTCGAGATC CTGCGCCATT GGGACGGGCA GCAGATCCGG GCCGAGGACG GCCGCGCGAC CACCTCGGCC GTGGGGCTGT TCCAGGCCTG GCTGGACGTG ATGGTCGAGG ACGTGCTGCG CGACGATAAT CCGGCGATCC CGCCGGCGAT CCTTTACAAC CGCATCTCAC GCACCGCGCA GATGCTGCAC AACGCGCTGC TGGGCGAGCG GGCCGGCGTG CCGCAGACCC ATGATTTCTT CAACGGCGCC GACGAGGCGG GCCGCAAGGA GATCATCCTT GCCTCGCTGG ACAAGGCGGC CGCGCGGCTG GCCGACAGGT TCTGCAGCCA GGAGCCCGCC GACTGGCGCA TCGAGATCAA GCAGCATGTG TTCGAGACCA GCAACTACCT GGGCATCCCT CAGGCCGGCG AGGACGAGGT TCGCGCCATC GGCACCTCGA TGAACCGCGG CACCGAGAAC AACCGGATCA CCTTTCGCGA AGGCAAGGCC GAGTTCTGCG CGGTGACGCC GCCGGGCCAG AGCGGCTTCA TCAGCCCCTC GGGCGAGGCT TCGCCGCATT ACGAGGACCA GTTGGCGCTT TACGAGGGTT TCGATTGCCG CCCGCAGGCG CTGACCCGCG ACGAGGTCGA AGCGGTGGCG GTGTCGCGCG AAACCCTTGC CGTTCCGCGG TAG
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Protein sequence | MSRSLLGRLL LSAGLSVLVA CPALADTQVE IVRDNWGVPH VYADDVHGLY AGFGYSVAQD RLFQMEMARR SVLGEVAEVL GIERLPFDIQ TRAMFDHADI RSQIEALAPE ERDILRGYAA GFNLWVDRVL ADPAKLMPRQ FNDFGFKPRR WTEFDVAMIY VGTMAGRFSG YSAELGNAKT LAELEAQFGP EKARVLFDQM FWNEDPLAPT TVPEGGQYQR KAGLAPSEPG RFAELLHAGG LPGDDDRPRA SNLWIAGPQK TTDGSTILIN GPQFGNFNPS YVFSIGLHGA GFDLTGNTPF AVPNVLFGTN GTIAWGATAG PRDVNDYYRL ELNPENPRQY RAHDGWKEMT ARRETFRVKG QPEVETTVWE SEYGVVGQID PGTATAYAFN RAWKGQEIST LMAWVDSTKA QNYEEWLDQA EKVATTINWY YADRDGNIGY VSPGHVPVRA EGHDQRLPAR PGKDDWQGVR PFADAPKGYN PSQGWIANWN NRSARGDAAN FEATPWGSAD RVVEIMARLD AREKLTPDEI WDINREISFL DINARYFLPF ILDAAEGIDP QSQRAELVEI LRHWDGQQIR AEDGRATTSA VGLFQAWLDV MVEDVLRDDN PAIPPAILYN RISRTAQMLH NALLGERAGV PQTHDFFNGA DEAGRKEIIL ASLDKAAARL ADRFCSQEPA DWRIEIKQHV FETSNYLGIP QAGEDEVRAI GTSMNRGTEN NRITFREGKA EFCAVTPPGQ SGFISPSGEA SPHYEDQLAL YEGFDCRPQA LTRDEVEAVA VSRETLAVPR
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