Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4812 |
Symbol | |
ID | 4583374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 307534 |
End bp | 308388 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639772116 |
Product | PaaX domain-containing protein |
Protein accession | YP_918569 |
Protein GI | 119387535 |
COG category | [K] Transcription |
COG ID | [COG3327] Phenylacetic acid-responsive transcriptional repressor |
TIGRFAM ID | [TIGR02277] phenylacetic acid degradation operon negative regulatory protein PaaX |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.33483 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCAGG GCGAGATGGC CAAGCGCGGG CTGATCGACG GGATATTGGA GGGGATGGCG CTGCGTTCGG CCGCGTTCAT CGTCACCGTC TATGGCGATG TGGTCGTGCC GCGCGGCGGC GTGTTGTGGA CCGGCACGCT GATCGAGGTC TGCGAGCGGG TCGGCATCAG CGAATCGCTG GTGCGCACCG CCGTCTCGCG CCTTGTCGCC GCCCACCGGC TGCGGGGCGA GCGGCTGGGG CGGCGCAGCT ATTACCGGCT GGACGCCTCG GCCCAGCGGG AGTTCGACCA GGCGGCGCGG TTGCTTTACA AACCCGAGGT TCCGGCGCGC GGCTGGCAGA TCCTGCACGC CCCCGACCTC ACCGAGGACG AGGCCCGCCA CCAGCGCATG GGCCATATGG GCGGGGCGGT CTTCATCCGT CCCGACCGCG GCCAGCCGGT GCCCGAGGGC GCGCTGCCTT TCCTTGCCTC GGACCCGCCC GAACTGGGCC GGATCGGGCA GTTCTGGGAT CTCTCGGCGC TGCATCAGCG TTATCTCGAC ATGCTGGTGC GCTTTGCGCC GCTGGCCGAG GCAGGGGCGG CGCTGTCGGA CGAGATGGCG CTGATCGCCC GGCTGCTCTT GGTGCATGAT TATCGCGGCG TCCTGCTGCG CGATCCGCGC CTGCCGCAGC CCGCCCTGCC GCCGGACTGG CAGGGGCATG AAGCGCGGGC GCTGTTCCGC CGCCTCTATC GCCAGCTTTC GCCGGCGGCG GAGCGCTGGA TCGGGACGCA TTTCGAGGGC AGCGGCGGCT TCCTGCCCGA GAAAACCGCC GAAAGCGAGG CGAGGCTGGC CGATCTGTGC CAGGCAACAG ATTGA
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Protein sequence | MRQGEMAKRG LIDGILEGMA LRSAAFIVTV YGDVVVPRGG VLWTGTLIEV CERVGISESL VRTAVSRLVA AHRLRGERLG RRSYYRLDAS AQREFDQAAR LLYKPEVPAR GWQILHAPDL TEDEARHQRM GHMGGAVFIR PDRGQPVPEG ALPFLASDPP ELGRIGQFWD LSALHQRYLD MLVRFAPLAE AGAALSDEMA LIARLLLVHD YRGVLLRDPR LPQPALPPDW QGHEARALFR RLYRQLSPAA ERWIGTHFEG SGGFLPEKTA ESEARLADLC QATD
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