Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4811 |
Symbol | |
ID | 4583373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 306183 |
End bp | 307388 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639772115 |
Product | beta-ketoadipyl CoA thiolase |
Protein accession | YP_918568 |
Protein GI | 119387534 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases [TIGR02430] beta-ketoadipyl CoA thiolase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.346578 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGACG CCTTCATCTG TGATGCGGTG CGCACGCCGA TCGGTCGCTA TGGCGGGGCG CTGGCCTCGG TCCGGGCGGA CGACCTGGCC GCGGTGCCGC TGAAAGCGCT GATGGAGCGC AATCCGGGCG TGGATTGGTC GGCGGTGGAC GACCTGATCT ATGGCTGCGC CAACCAGGCG GGCGAGGACA ATCGCAATGT CGGGCGCATG GCGGTGCTGC TGGCCGGGAT GCCGGTGGGC GTGCCGGGGA CGACGGTGAA CCGGCTTTGC GGCTCGGGCA TGGATGCGGT CGGCATGGCG GCCCGCGCCA TCAAGGCGGG CGATTGCGAT TTCGTCATCG CCGGCGGCGT CGAAAGCATG ACCCGCGCCC CCTTCGTGAT GCCCAAGGCG GAAACCGCCT TTTCCCGCGC CAATGCGGTC TATGACACCA CCATCGGCTG GCGCTTCGTC AATCCGGCGA TGAAGGCGCG GTTCGGCATC GATTCGATGC CCCAGACCGC CGACAACGTG GCCGCCGATT TCAGCATCAG CCGCGCCGAC CAGGACGCTT TCGCTGCCCG CAGCCAGGCC CGCTGGGAAG CGGCGCAGAA GGCGGGCGTC TTTGCCGACG AGATCGTGCC GGTCATCGTG CCGCAGAAGA AGGGCGAGCC CGTCGTGGTC GATACCGACG AGCATCCCCG CCCCGGCACC ACGGCCGAGA CGCTGGCCAA GCTCAGGGGC GTGAACGGTC CCGACCTGAC GGTGACGGCC GGCAATGCCT CGGGCGTGAA CGACGGCGCT GCCGCCTTGG CGATCCTGTC GGGTGCGGCG GCGGAGCGGC ACGGCCTGGT GCCGAAGGCG CGCATCGTCG CCATGGCGGC GGCGGGGGTC GAGCCGCGCA TCATGGGCAT CGGCCCGGCG CCGGCGGCGA AAAAGGTCTT GGCGCGCGCG GGGCTGACCA TCGGGCAGAT GGATGTGATA GAATTGAACG AGGCCTTCGC CAGCCAGGCG CTGGCGACCC TGCGCGATCT TGGCCTGCCC GACGATGCCG CCCATGTGAA CCCGAACGGC GGCGCCATCG CGATCGGCCA TCCGCTTGGC ATGTCGGGGG CCCGGCTTGT GACGACGGCG ATGTATCAGT TGCATCGCAC CGGAGGGCGC TATGCGCTTT GCACCATGTG CATCGGCGTG GGACAGGGCA TCGCCCTCAT CATCGAACGC GTTTGA
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Protein sequence | MQDAFICDAV RTPIGRYGGA LASVRADDLA AVPLKALMER NPGVDWSAVD DLIYGCANQA GEDNRNVGRM AVLLAGMPVG VPGTTVNRLC GSGMDAVGMA ARAIKAGDCD FVIAGGVESM TRAPFVMPKA ETAFSRANAV YDTTIGWRFV NPAMKARFGI DSMPQTADNV AADFSISRAD QDAFAARSQA RWEAAQKAGV FADEIVPVIV PQKKGEPVVV DTDEHPRPGT TAETLAKLRG VNGPDLTVTA GNASGVNDGA AALAILSGAA AERHGLVPKA RIVAMAAAGV EPRIMGIGPA PAAKKVLARA GLTIGQMDVI ELNEAFASQA LATLRDLGLP DDAAHVNPNG GAIAIGHPLG MSGARLVTTA MYQLHRTGGR YALCTMCIGV GQGIALIIER V
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