Gene Pden_4796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4796 
Symbol 
ID4583358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp291289 
End bp292161 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content66% 
IMG OID639772100 
Productinner-membrane translocator 
Protein accessionYP_918553 
Protein GI119387519 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.212285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.40666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAC TTTTGCAATT CCTGTTTTCA GGGCTGACGG TGGGCGCGGT CTATGCGCTG 
GTCGCCCTTG GTTTCACGAT CATCTACAAC GCCTCGGATG TGGTGAACTT CGCCCAGGGC
GAGTTCGTCA TGCTGGGCGG CATGATCACA TGGTTTGCCC ATGCCGCCGG GCTGCCGCTG
CCGCTGGCGG CGCTGATCGC CATCGTCGCC ACCGCCGCGC TGGGGGTCGC GATCAACAAG
CTGGCCATCG AGCCGGCGCG CGGCGCGCCC GTCGTCTCGC TGATCATCAT CACCATCGGC
GCCTCGGTCT TTCTGCAAGG CGCGGCGCAG CTGGTGTTCG ACAAGCAGAT CCACAGCTTC
CCGGCCTTTT CGGGCGACAC GCCGCTGCGC ATCGGCGGCG CGACGATCCA ACCGCAAAGC
CTGTGGGTGA TCGGCGGCGC GCTGGTGGTC TTTGCCGGCC TGTGGCTGTT CTTCACCCGC
ACGCTCCTGG GCCGGGCGGT GCTGGCGACC TCGAACAACC GGCTCGCGGC CCAGCTTGTC
GGCATCAACA CGAATTTCGT CATGACGCTG TCCTTTGCGC TTTCGGCCGG GATCGGTGCT
CTGGCGGGGG TGCTGGCGAC GCCGATCACG CTGACCGCCT ACAATGTCGG CATCGGCTTT
GCGCTGAAGG GCTTTGCCGG TGCCATGCTG GGCGGCATGG GCAATCCCAA GGGCGCGCTG
GCCGGCGGCT TCCTGATCGG GCTGATCGAG GCGCTGACGG CGGGCTACCT GTCCTCGACC
TACAAGGAGG CGGCGGCATT CGTCGTGATC CTGCTGGTCC TGTTCTTCAT GCCGCAGGGC
CTGTTCGGCC GCAAATCGAC GGAGCGGGTG TGA
 
Protein sequence
MSELLQFLFS GLTVGAVYAL VALGFTIIYN ASDVVNFAQG EFVMLGGMIT WFAHAAGLPL 
PLAALIAIVA TAALGVAINK LAIEPARGAP VVSLIIITIG ASVFLQGAAQ LVFDKQIHSF
PAFSGDTPLR IGGATIQPQS LWVIGGALVV FAGLWLFFTR TLLGRAVLAT SNNRLAAQLV
GINTNFVMTL SFALSAGIGA LAGVLATPIT LTAYNVGIGF ALKGFAGAML GGMGNPKGAL
AGGFLIGLIE ALTAGYLSST YKEAAAFVVI LLVLFFMPQG LFGRKSTERV