Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4794 |
Symbol | |
ID | 4583356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 289554 |
End bp | 290333 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639772098 |
Product | ABC transporter related |
Protein accession | YP_918551 |
Protein GI | 119387517 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.130359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.133792 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTGC TTTCGGTCGA GGGTCTGGGC ATCAGCTTCG GCGGCATCAA GGCCGTGCAT GATGTCAGCT TCAAGGTCGA GCCGGGCGAG ATCGTCTCGG TCATCGGCCC GAACGGCGCC GGCAAGACCA CGCTGTTCAA CATGATCTCG GGCGTCTATC GGCCCGGCTT GGGCCGCGTG GTGCTGGAGG GCGAGGACGT GACCGGCATG GCGCCGTTCC GGCTGGCGCA GCGGGGCATG TCGCGCACCT TCCAGAACCT GCAGATATTC CAGAACATGA CGGTGCTGGA AAACGCCATC TCGGGCTTTC ACTTGCAGGA AAAGGGGCCG GTCCTGGCGG ATCTCCTGCA TCTGCCGTCC TCGCGCCGCC GGGCGCGGGC GGCCGATGCG GGCGCGCGCG CGCTTCTGGC CCGCGTCGGG CTGGAGCGCG CGGCGGATCG CGAGGCGGGG AACCTGTCCT ATGGCTCGCT CAAGCGGCTG GAGATCGCCC GCGCGCTGGC GATGAAGCCC AAGGTGCTGT TGCTGGACGA GCCGGCGGCG GGCTGCAACG CCGTCGAGAC CGAGGAGATC GACCACCTGA TCGCCGAGGT CGCGGCATCC GGCACCGCCA TCCTGCTGGT TGAGCACGAC ATGAAGATGG TCATGCGCAT CTCCAGCCAT ATCGTGGTGC TGGACCATGG CGAAAAGATC GCTGAGGGCT CGCCGGCCGA GGTCAGCCGC AACCCGGCGG TGATCGCCGC CTATCTGGGA ACCGAGGAGG GTGCCGATGC TGACGGTTGA
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Protein sequence | MTLLSVEGLG ISFGGIKAVH DVSFKVEPGE IVSVIGPNGA GKTTLFNMIS GVYRPGLGRV VLEGEDVTGM APFRLAQRGM SRTFQNLQIF QNMTVLENAI SGFHLQEKGP VLADLLHLPS SRRRARAADA GARALLARVG LERAADREAG NLSYGSLKRL EIARALAMKP KVLLLDEPAA GCNAVETEEI DHLIAEVAAS GTAILLVEHD MKMVMRISSH IVVLDHGEKI AEGSPAEVSR NPAVIAAYLG TEEGADADG
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