| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4792 |
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| Symbol | |
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| ID | 4583354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 286921 |
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| End bp | 288861 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639772096 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_918549 |
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| Protein GI | 119387515 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.283585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.144817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTAA CCATTGCCCG CCAAGGGGAA ATCGCTGTCG TCACCGTAGA CAACCCGCCC
GTCAACGCAC TGTCCGCGGC TCTGCGGCAG GGACTGTGGG ATGCCGCGGA CACGCTGGAC
GCCGACGCCT CGGTCGCGGC GGTGGTGCTG GTCTGCGCCG GCCGCACCTT CATCGCCGGG
GCCGACGTGA CCGAATTCGG CAAGCCGCCG GTCCCGCCGC ACCTGCCCGA TCTGGTCGCG
CGGATCGAGG GCGCGCAGAA GCCCTGGACC GCCGCGATCC ACGGCTCGGC GCTTGGCGGC
GGGCTGGAGG TCGCGCTGGG GTGCCGGTTT CGCGTGGCGG TCCCGGATGC CTCGCTGGGC
CTGCCCGAGG TGAGCCTCGG CATCGTTCCC GGCGCCGGCG GCACGGTGCG CACGCCCCGC
GTGGTGGGTG TTCCGGCGGC GGTCGATCTG GTGACCTCGG GCCGGCCCAT GCGCGCGGCG
AAAGCCGCCG AGGCCGGGCT GGTCGATGCG GTGATCCAGG GCGATCTGCT GGAAGGCGCC
GTGACCTTCG CGCGGCAGGC GTTGACCCGG CCGCTGCCCG AACCTGCCTC GTCCCGGCCT
GTCGCCGCGC CGGAAGCCGA GTTCTGGGCC GAGCAGGAGA AAGCCGTGGC CAAGGTCGCC
AAGGGTGCCG CCGCGCCGCT GCGGGCGCTC GCCTGTCTGC GCAAGGCGGC CGAGGCGGGC
TTTGCCGAGG CCATGGCCTT TGAGCGCGAA ACCTTCCTGG AACTGCGCGG CTCGGATCAG
GCGGCGGCGC TGCGCCACGT CTTCTTTGCC GAGCGTGCCG CGCCGCGCCC GGCTGCATTG
CGCGACGTGG AGCCCTTGCC CCTGCGCCGC GCGGCGGTGA TCGGCGGCGG CACCATGGGC
GCCGGCATCG CCGCGGCCCT GCGCGACGCC GGCCTGCCGG TGGTGCTGGT CGAGCGCGAC
GACGAGGCGG TGGCGCGCGG CATGGCCAAC CTGCGCGGCA TCTTCGACGG CGCGGTGCGG
CGCGGCAAGC TGACCGAGGC GCAGGCCGCA GCCCGGCTGG CGGGCGTCGC CGGGACGACC
GATTACGCCG CGCTGGCCGA TGCCGACCTG GTCATCGAGG CGGTGTTCGA GGAAATCGGC
GTCAAGCGCG CCGTGTTCGA GCAACTTGCC CGGGCCTGCG GCCCAGATGC GGTGCTGGCG
ACCAATACCT CTTATCTCGA CCCGCGCGCC ATCGCCGAGG GGCTGCCCAA TCCCGGCCGC
TTCATCGGCC TGCATTTCTT CAGCCCGGCC AATGTGATGA AGCTCCTGGA GATCGTGCCG
GTGCCGGAAA CCTCGGACCG CACGCTGGCT ACCGGCTTCG CGCTTGCGCG GGCGCTGAAA
AAGATCCCGG TCCGCGCCGG CATCTGCGAG GGCTTCATAG GCAACCGCAT CCTGAAACGC
TATCGCGCGG CGGCCGAGGC GCTGGTCCGC AAGGGCGTGC CGATTGCCGA AATCGACGCC
GCCATGCGCG GCCACGGCTT TGCCATGGGT CCGTTCGAGG CGCAGGATCT GGGCGGGCTC
GACATCGCCT TCCTGCAACG CGAGGGCGCG CGGGCGGCAG GGCAGGACGT GGCCGAGACG
CTGGGCGACA TCCTGGTGCG CGTGGGCCGC AAGGGGCAAA AGACCGGCGG CGGCTGGTAT
GACTATGCCC CGGGTGAGCG CAAGCCGCAG CCCTCGGCCT CGGTGGCAGA GTTGCTGGCC
CGCGAAATCG CGCCCGGCGC AGCGATGAGC CGTGACCAGA TCGCGCAGGC CCTTGTGGCC
GAGATGGCTG CCGAGGGACA GGCGATCCTG GACGAAGGCA TCGCCCAGGC GCCCGCCGAC
ATCGATCTGG TGGAAATCCA CGGCTATGGC TTCCCGCGCT GGCGCGGCGG GCCGATGTTC
GCCACCGGCA TCCGGGGCTG A
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| Protein sequence | MTVTIARQGE IAVVTVDNPP VNALSAALRQ GLWDAADTLD ADASVAAVVL VCAGRTFIAG
ADVTEFGKPP VPPHLPDLVA RIEGAQKPWT AAIHGSALGG GLEVALGCRF RVAVPDASLG
LPEVSLGIVP GAGGTVRTPR VVGVPAAVDL VTSGRPMRAA KAAEAGLVDA VIQGDLLEGA
VTFARQALTR PLPEPASSRP VAAPEAEFWA EQEKAVAKVA KGAAAPLRAL ACLRKAAEAG
FAEAMAFERE TFLELRGSDQ AAALRHVFFA ERAAPRPAAL RDVEPLPLRR AAVIGGGTMG
AGIAAALRDA GLPVVLVERD DEAVARGMAN LRGIFDGAVR RGKLTEAQAA ARLAGVAGTT
DYAALADADL VIEAVFEEIG VKRAVFEQLA RACGPDAVLA TNTSYLDPRA IAEGLPNPGR
FIGLHFFSPA NVMKLLEIVP VPETSDRTLA TGFALARALK KIPVRAGICE GFIGNRILKR
YRAAAEALVR KGVPIAEIDA AMRGHGFAMG PFEAQDLGGL DIAFLQREGA RAAGQDVAET
LGDILVRVGR KGQKTGGGWY DYAPGERKPQ PSASVAELLA REIAPGAAMS RDQIAQALVA
EMAAEGQAIL DEGIAQAPAD IDLVEIHGYG FPRWRGGPMF ATGIRG
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