Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4787 |
Symbol | |
ID | 4583349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 282787 |
End bp | 283605 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639772091 |
Product | phosphonate ABC transporter, ATPase subunit |
Protein accession | YP_918544 |
Protein GI | 119387510 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3638] ABC-type phosphate/phosphonate transport system, ATPase component |
TIGRFAM ID | [TIGR02315] phosphonate ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.334656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0646281 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTTGCAG TTCAGAACGT CACCCGCGTC TTTTCCGGGC GCGCCGCGGT GGACGACATC AGCTTTGCCG TGGACGGGCC GGCCTTCGTC GGCATCATCG GCCGCTCGGG GGCGGGCAAG TCGACATTCC TGCGCATGAT GAACCGGCTG ACCGACGCCT CGGCCGGGCG GATCTGCGTG GACGGGCGCG ACATCCTGGC GCTGCGCGGC CACGACCGCC GGGCCTGGCA AAGCCAATGC GCGATGATCT TCCAGCAGTT CAACCTGGTG CCGCGCATGG ACGTGGTCTC GAACGTGCTG CACGGGCTGC TGAACCGCCG TCCGGTGCTG GCCACGCTGT TCAACCTCTG GCCGCGCGCC GACATCCTGC GTGCGCTGGA GATCCTCGAC CGGCTCGGTA TCGCCGAACA GGCCCCCAAG CGGGCCGAGG CGCTGTCGGG CGGCCAGCAG CAGCGCGTCG CCATCGCCCG CGCGCTGATG CAGGACCCCC GGATCATCCT GGCCGACGAG CCCATCGCCA GCCTCGACCC GATGAACGCG CAGATCGTCA TGGACACGCT CAAGCGCATC AATGTCGAGG ACGGGCGCAT GGTCATCGCC AACCTGCACA CGCTGGACAC GGCGCGGCGC TATTGCGACC GGGTGATCGG CATGCGCGAC GGCCGCATCG TCTTCGACGG CACGCCCGCG CAGCTTTCGA CCGGCGTCGC CCGCGACATC TATGGTGCGG ACCACAGCTT CAACGAGGCC GCAACCTCGA CCGCGATCCC CGCCGACGCC TCGGCCGACG CCGCCTATGC CGCGCGGCTG ATGGCCTGA
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Protein sequence | MLAVQNVTRV FSGRAAVDDI SFAVDGPAFV GIIGRSGAGK STFLRMMNRL TDASAGRICV DGRDILALRG HDRRAWQSQC AMIFQQFNLV PRMDVVSNVL HGLLNRRPVL ATLFNLWPRA DILRALEILD RLGIAEQAPK RAEALSGGQQ QRVAIARALM QDPRIILADE PIASLDPMNA QIVMDTLKRI NVEDGRMVIA NLHTLDTARR YCDRVIGMRD GRIVFDGTPA QLSTGVARDI YGADHSFNEA ATSTAIPADA SADAAYAARL MA
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