Gene Pden_4787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4787 
Symbol 
ID4583349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp282787 
End bp283605 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content69% 
IMG OID639772091 
Productphosphonate ABC transporter, ATPase subunit 
Protein accessionYP_918544 
Protein GI119387510 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3638] ABC-type phosphate/phosphonate transport system, ATPase component 
TIGRFAM ID[TIGR02315] phosphonate ABC transporter, ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.334656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0646281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTGCAG TTCAGAACGT CACCCGCGTC TTTTCCGGGC GCGCCGCGGT GGACGACATC 
AGCTTTGCCG TGGACGGGCC GGCCTTCGTC GGCATCATCG GCCGCTCGGG GGCGGGCAAG
TCGACATTCC TGCGCATGAT GAACCGGCTG ACCGACGCCT CGGCCGGGCG GATCTGCGTG
GACGGGCGCG ACATCCTGGC GCTGCGCGGC CACGACCGCC GGGCCTGGCA AAGCCAATGC
GCGATGATCT TCCAGCAGTT CAACCTGGTG CCGCGCATGG ACGTGGTCTC GAACGTGCTG
CACGGGCTGC TGAACCGCCG TCCGGTGCTG GCCACGCTGT TCAACCTCTG GCCGCGCGCC
GACATCCTGC GTGCGCTGGA GATCCTCGAC CGGCTCGGTA TCGCCGAACA GGCCCCCAAG
CGGGCCGAGG CGCTGTCGGG CGGCCAGCAG CAGCGCGTCG CCATCGCCCG CGCGCTGATG
CAGGACCCCC GGATCATCCT GGCCGACGAG CCCATCGCCA GCCTCGACCC GATGAACGCG
CAGATCGTCA TGGACACGCT CAAGCGCATC AATGTCGAGG ACGGGCGCAT GGTCATCGCC
AACCTGCACA CGCTGGACAC GGCGCGGCGC TATTGCGACC GGGTGATCGG CATGCGCGAC
GGCCGCATCG TCTTCGACGG CACGCCCGCG CAGCTTTCGA CCGGCGTCGC CCGCGACATC
TATGGTGCGG ACCACAGCTT CAACGAGGCC GCAACCTCGA CCGCGATCCC CGCCGACGCC
TCGGCCGACG CCGCCTATGC CGCGCGGCTG ATGGCCTGA
 
Protein sequence
MLAVQNVTRV FSGRAAVDDI SFAVDGPAFV GIIGRSGAGK STFLRMMNRL TDASAGRICV 
DGRDILALRG HDRRAWQSQC AMIFQQFNLV PRMDVVSNVL HGLLNRRPVL ATLFNLWPRA
DILRALEILD RLGIAEQAPK RAEALSGGQQ QRVAIARALM QDPRIILADE PIASLDPMNA
QIVMDTLKRI NVEDGRMVIA NLHTLDTARR YCDRVIGMRD GRIVFDGTPA QLSTGVARDI
YGADHSFNEA ATSTAIPADA SADAAYAARL MA