| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4778 |
|---|
| Symbol | phnK |
|---|
| ID | 4583340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | - |
|---|
| Start bp | 275013 |
|---|
| End bp | 275795 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639772082 |
|---|
| Product | phosphonate C-P lyase system protein PhnK |
|---|
| Protein accession | YP_918535 |
|---|
| Protein GI | 119387501 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4107] ABC-type phosphonate transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.326884 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.35491 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTGA TGCAGAACGC CATCACCGCC GCACCGCTGC TGTCGGTGCA GGGCTTGACG
AAACGCTACG GCGCGCGGAT CGGCTGCGCC GGCGTCGGCT TCGACCTCTA TCCCGGCGAG
GTGCTGGGCA TCGTCGGCGA AAGCGGCTCG GGGAAGTCGA CGCTGCTGTC CTGCCTGGCC
GGGCACCAGC GCCCGGACGA GGGGCGGATC CTGTTCGACG GCGCCGACGT GCTGGCTTTC
TCGGAAGCCG AGCGGCGCCG GCTGTTGCGG GGCGACTGGG CCTATGTCCA CCAGAACCCG
CGCGACGGGC TGCGCATGGG CGTCTCGGCC GGCGGGAATG TCGGCGAGCG GCTGATGGCC
GTGGGCGCGC GCAACTATGC CGCCATCCGC GAAAGCGCGA CCGACTGGCT GGGCCGGGTC
GAGATCGCGG CGGACCGGAT CGACGACCGG CCCTCGGCCT TTTCGGGCGG CATGCAGCAG
CGTTTGCAGA TCGCGCGCAA CCTGGTGACC GGGCCGCGGC TGGTGTTCAT GGACGAGCCG
ACCGGCGGCC TTGACGTCAG CGTCCAGGCG CGGCTTCTGG ACCTGTTGCG CGGCCTGGTG
CGCGACCTTG GCCTGTCGGT GGTGATCGTG ACCCACGACC TGGCCGTAGT GCGGTTGCTG
GCCGACCGGC TGATGGTGAT GAAATCGGGC AGGGTGGTGG AATGCGGGCT GACCGACCAG
GTGCTGGACG ATCCGCAGCA CGCCTATACC CAGCTTCTCG TGTCCTCTGT CCTTCAGGTG
TAG
|
|---|
| Protein sequence | MTLMQNAITA APLLSVQGLT KRYGARIGCA GVGFDLYPGE VLGIVGESGS GKSTLLSCLA
GHQRPDEGRI LFDGADVLAF SEAERRRLLR GDWAYVHQNP RDGLRMGVSA GGNVGERLMA
VGARNYAAIR ESATDWLGRV EIAADRIDDR PSAFSGGMQQ RLQIARNLVT GPRLVFMDEP
TGGLDVSVQA RLLDLLRGLV RDLGLSVVIV THDLAVVRLL ADRLMVMKSG RVVECGLTDQ
VLDDPQHAYT QLLVSSVLQV
|
|---|
| |