Gene Pden_4773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4773 
Symbol 
ID4583276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp271318 
End bp271791 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content70% 
IMG OID639772077 
Productalkylhydroperoxidase 
Protein accessionYP_918530 
Protein GI119387496 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.792481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.557734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCCC GCATGACCGA TCATTTCGAC CGCACCAGGA CCGGCTATCG CGCGCTGACA 
GGCTTCGAGG CAGCGTTGCA GGCCGGCCCG CTGGAGCCGA AGCTGCTGCA CCTGGTCAAG
CTGCGCGCCT CGCAGATCAA TGGCTGCGCC TTCTGCATCC AGATGCACAC GGCCGAGGCG
TTGCAGGATG GCGAGACACA TCTGCGCCTG CACATGGTCG CCGGCTGGCG CGACAGCCCG
CTGTTTTCCG ACCGCGAGCG CGCCGCGCTG GCCTGGACCG AGGCGCTGAC GCTGATCGCC
CAGACCGGGG CGCCGGACGC GGATTGGCAG GCGGTCGAGG CAGCCTTTTC CCCGGACGAG
CGCGCCTGGC TGACGCTGGC CATCGGCGCG ATCAACCTGT GGAACCGGGT GCAGGTCGGC
TTGCGCGCCC CGCATGCGAT GGGGCTGCCG GCGGAACGGG CCGATGCGGC CTGA
 
Protein sequence
MTPRMTDHFD RTRTGYRALT GFEAALQAGP LEPKLLHLVK LRASQINGCA FCIQMHTAEA 
LQDGETHLRL HMVAGWRDSP LFSDRERAAL AWTEALTLIA QTGAPDADWQ AVEAAFSPDE
RAWLTLAIGA INLWNRVQVG LRAPHAMGLP AERADAA