Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4772 |
Symbol | |
ID | 4583275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 270444 |
End bp | 271328 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639772076 |
Product | RNA polymerase sigma factor SigJ |
Protein accession | YP_918529 |
Protein GI | 119387495 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.586896 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCCTG ACCGCGCCAC GGAAACCTTT GAGGCGCAGC GGCCCCGTCT GCTGCGCCTG GCCTATCGCA TGCTCGGCAG CCATGCCGAG GCCGAGGACA TCCTGCAGGA AGCCTGGCTG CGCTGGGACC GCAGCGACCG GGCGGCCATC GCCGAGCCGG CGGCATGGCT GACGCGCGTG GTCTCGCGCC TGTGCCTCGA CCAGATGAAA TCGGCCCGTG CCCGGCGCGA GTCCTATCCC GGCACCTGGC TGCCCGAGCC GCTGATCGAA CCCCAAGACG ACAGCCTGCG CGCCGACAAC CTGACGCTGA CCCTGATGAT GGCGCTGGAG CGGTTGACGC CGCTGGAACG CGCCGCCTTC CTGCTGCACG ACGTCTTTGG CGAAGGGCTG GACGAGGTCG CGGAAACCAT CGGCCGCAGC CCGGCCGCCA CGCGCCAGCT TGCGGCGCGG GCGCGGGCGC ATGTGCGCAT CGACCGGCCC CGCCACGCCG TTCCGAAAGA GGCCGGCGAA GTGCTGGCCC GGGCCTTTTT CGAGGCTTGC CGGCAGGGCG ATCCGGCCGT GCTGGGCCGG ATCCTCGCGC GCGACGTGCA GGTCCATTCC GATGGCGGCG GCAAGGTGCT GGCCTTCCTC AACGTCATCG CCGGGGCCGA GCGCGTCGCC CGGCTTTATG CCGGGCTGGC GCGCAAGCCC GGCCCGCGGC CCGAATTCCT GGGCGCCGTC ACCATCGACG GCCTGCCGGG TTTCCTCAGC CGCGTCGGCG GCCACCTGCA GACCACCGCC TTGCAGATCA GGGATGACGG CCGCATCGCC GCCATCTTCA TCACCCGCAA CCCCGACAAG CTGGCGGGGC TGCGGCCGGG CCGTCAGAAC GGGCTGTCGG GATAA
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Protein sequence | MRPDRATETF EAQRPRLLRL AYRMLGSHAE AEDILQEAWL RWDRSDRAAI AEPAAWLTRV VSRLCLDQMK SARARRESYP GTWLPEPLIE PQDDSLRADN LTLTLMMALE RLTPLERAAF LLHDVFGEGL DEVAETIGRS PAATRQLAAR ARAHVRIDRP RHAVPKEAGE VLARAFFEAC RQGDPAVLGR ILARDVQVHS DGGGKVLAFL NVIAGAERVA RLYAGLARKP GPRPEFLGAV TIDGLPGFLS RVGGHLQTTA LQIRDDGRIA AIFITRNPDK LAGLRPGRQN GLSG
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