Gene Pden_4765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4765 
Symbol 
ID4583268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp262357 
End bp263724 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content65% 
IMG OID639772069 
Productsodium:dicarboxylate symporter 
Protein accessionYP_918522 
Protein GI119387488 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.21852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATCG ACACCACGGC CGCGCCGGTC GCTCACGCAC CGCGACCCTT TTACAGGCAT 
CTTTATTTCC AGGTTCTTTG CGCCATCGTC GCCGGCGCGC TGATCGGGCA CTTTTATCCC
GAGACCGGCG AGGCGCTGAA ACCCCTGGGC GATGCCTTCA TCAAACTGGT CAAGATGATC
ATCGCCCCGG TCATCTTCCT GACCATCGTC ACCGGGCTGG CCGGGATGGG CACGCTCAAG
GGCGTGGGCT CGGTCGTCGG CAAGGCCTTC GGCTATTTCC TGACCTTCTC GACGCTGGCG
CTGGTGGTCG GGCTGATCAC CGCCAACGTC ATCCGCCCCG GCGCCGGCAT GAACATCGAC
CCGGCATCGC TGGATGCCAG CAAGGTCGCC GACTATGCCA GCAAGGCGCA TGAATCGTCG
CTGACCGGCT TTGTCATGGA CATCATCCCG TCCACGATCA CCTCGGCCTT CGTCGACGGC
AACATCCTGC AAGTGCTGTT CGTCGCCATC CTGTTCGGCA TCGGCCTGAT CCTGATCGGC
GACAAGGGCA AGCCGGTCGT CGCGCTGTTC GAGGCGATCA GCCATGCCGT CTTCCGCATG
GTGGACATCC TGATGAAGGC CGCGCCCATC GGCGCCTTCG GCGCCTTCGC CTTCACCATC
GGCAAATACG GCATCGCCTC GGTGGTGAAC CTGGCGACGC TGGTCGGCAC CTTCTACCTG
ACCTCGGCCC TGTTCGTCAT CGTGGTCCTG GGCACGGTCT GCATGCTCAA CGGCTTTTCG
ATCTTCCGGC TGATTTCCTA TCTCAAGGCC GAGATCCTGC TGGTGCTGGG CACCTCTTCC
TCGGAATCGG CGCTGCCCTC GCTGATGGAA AAGATGGAGA AGGCCGGCTG CAAGCGCTCG
GTCGTCGGGC TGGTCGTGCC CACCGGCTAC AGCTTCAACC TGGACGGCAC CAACATCTAC
ATGACGCTGG CCGCGCTGTT CATCGCCCAG GCGACGAATA CCGACCTGAC GCTGCAACAG
CAGATCCTGC TGCTGCTCGT CGCCATGCTG TCGTCGAAGG GTGCGGCAGG CGTGACCGGC
GCGGGCTTCA TCACCCTGGC CGCAACGCTT TCGGTGGTGC CGACCGTGCC GGTCGCCGGC
ATGGCGCTGA TCCTGGGCGT GGACCGCTTC ATGTCGGAAT GCCGCTCGAT CACCAACTTC
ATCGGCAATG CGGTGGCGAC CGTCGTCGTC AGCCGCTGGG AGGGCGCGCT GGACCGCGAG
CAGTTCGACC GCGTGCTGGG CGGCGAGGCC GGGGGCGAGG TCGCCCCGAT CCACGACCTG
CACGGCGCCC CCGCCGGGCT GCGCCTGAAC GAGGCCAGCG CCGACTGA
 
Protein sequence
MHIDTTAAPV AHAPRPFYRH LYFQVLCAIV AGALIGHFYP ETGEALKPLG DAFIKLVKMI 
IAPVIFLTIV TGLAGMGTLK GVGSVVGKAF GYFLTFSTLA LVVGLITANV IRPGAGMNID
PASLDASKVA DYASKAHESS LTGFVMDIIP STITSAFVDG NILQVLFVAI LFGIGLILIG
DKGKPVVALF EAISHAVFRM VDILMKAAPI GAFGAFAFTI GKYGIASVVN LATLVGTFYL
TSALFVIVVL GTVCMLNGFS IFRLISYLKA EILLVLGTSS SESALPSLME KMEKAGCKRS
VVGLVVPTGY SFNLDGTNIY MTLAALFIAQ ATNTDLTLQQ QILLLLVAML SSKGAAGVTG
AGFITLAATL SVVPTVPVAG MALILGVDRF MSECRSITNF IGNAVATVVV SRWEGALDRE
QFDRVLGGEA GGEVAPIHDL HGAPAGLRLN EASAD