| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4764 |
|---|
| Symbol | |
|---|
| ID | 4583267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | - |
|---|
| Start bp | 260470 |
|---|
| End bp | 262152 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639772068 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_918521 |
|---|
| Protein GI | 119387487 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCA CAATCGATTC GCAAGGCGAG GGCTCGCGTC CCATGCTGCG GCGGCTGATG
GTCGCGGCGG CCGTGGCGCT GGCCATGCTG GCGGCGCTGG CGCTGACCTT TCGGCTGGCC
CATGACAATG CCGCCCGCGC CCTGACCGAG CGGCTGGCGG TCAGCGCGCA AAGCCGGGTG
CAGACGCTGG AAAGCGTGCT GGCCAAGCAG CGCGCCGTGG CGACGGTGCT GGCCGACGAT
GCCGCCGTGC TTCAGGCGCT GGCCCAGCCG TCGCAGGCCA ACGTCTCGCG CGTGTCGCAA
AAGCTGGAGC GGCTGCAGGA ACAGACCAGC AGCGCGGTGA TCTATCTGCT GAACCGCGAC
GGCGTGGCCG TCGCCGCCTC GAACTGGCAC GATCCCGACA GTTTCGTCGG CTCGGACTAC
AGCTTCCGCA GCTATTTCAG CGATGCGCTG CTCAGGGGCG AGGCGACGCA ATTCGCGCTT
GGCACCGTCA GCAAGCGGCC GGGACTTTAC CTGTCCCACG ACGTGCCGTC CGGGGACGGA
CCCCTGGGCG TCATCGTGGT GAAGGTAGAG TTCGACGCGA TGGAGCAGGG CTGGGCCCGG
GCGGCCGAGA CCACGCTGGT CACCGACGCC ACCGGGCAGG TGATCCTGGC AAGCCGGCCC
GGGCTGCGCT TTGCGCCGCT GCCGCCGGTC GGGGCCGGGC AGGTCTCGGC CCGGCGCGAG
GTGCCGGGGG CGGGTTGGGA GCTGTGGATC CACGCGCCGG GGGCCGAGGC GGTGCGGGCG
GGGCTGCTGG CCGCCGGGAC GGTCGGCTTC CTGTTCACGC TGCTGCTGGC CGGTGGGGTT
TCGGCGGCGC GCGCCCGCAC CCGCGCCACC CGCCGCATCG AGGCCGAGCG CCGCTATCGC
GCCGATCTGG AGCGTGCCGT GGCCGAGCGC ACCCGCGACC TGTCCGACGA GATGCGCGAG
CGCCGCGCGG CCGAGCAGCG GCTGGCACAG TTGCAGGGCG AGATGGTGCA GGCCAACAAG
CTGGCGACGC TGGGCCAGAT CACCGCCGGC GTCGCGCATG AGGTGAACAC GCCGCTGGCT
ACCATCCGCC TGCTGGCCGA GAACAGCCGG CACATGCTGC CCGAGGACGC CCCCGATCTG
GATCGCAACC TGGCCCAGAT CCTGCGCATG ACCGACCGCA TCGCGCAGAT CACCACCGAG
CTGCGCGGCT TTGCCCGCAA GGCCACGGGC GAGCTGGGTC CGGTGCCGCT CAAGGATGCG
CTGGACGCGG CGCTGCTGCT GACCGCCAGC CGGCGGCGGG CGCAGGACAT CCGCCTGACC
CTGCCCCAGA TCCCGCCCGG CCTGCGGGTC ATGGCCGAGA CGGTGCGGCT GGAACAGATC
CTGGTGAACC TGATCCAGAA CGCGCAAGAG GCGCTGGAGG GCCGGCCCGA CCCGGAAATC
CGCATTACCT TGCGGGACGG GCCGGTGCTG CGGCTCAGCA TCTCGGATAA CGGGCCGGGG
CTTTCGCCGC GGATCGCGGC CAATCTTTTC ACCCCCTTTG CCACCAGCAA GCCCGAGGGG
CTGGGCCTGG GCCTGGTGAT CTCGCAAGAG ATCGCGCGGG ATTTCGGCGG CAGCCTCACG
GCCGAGCCGT CGCGTGCCGG CGAGGGTGCG ACCTTCCACC TTGACCTGCC GAAAGCCGCA
TGA
|
|---|
| Protein sequence | MAATIDSQGE GSRPMLRRLM VAAAVALAML AALALTFRLA HDNAARALTE RLAVSAQSRV
QTLESVLAKQ RAVATVLADD AAVLQALAQP SQANVSRVSQ KLERLQEQTS SAVIYLLNRD
GVAVAASNWH DPDSFVGSDY SFRSYFSDAL LRGEATQFAL GTVSKRPGLY LSHDVPSGDG
PLGVIVVKVE FDAMEQGWAR AAETTLVTDA TGQVILASRP GLRFAPLPPV GAGQVSARRE
VPGAGWELWI HAPGAEAVRA GLLAAGTVGF LFTLLLAGGV SAARARTRAT RRIEAERRYR
ADLERAVAER TRDLSDEMRE RRAAEQRLAQ LQGEMVQANK LATLGQITAG VAHEVNTPLA
TIRLLAENSR HMLPEDAPDL DRNLAQILRM TDRIAQITTE LRGFARKATG ELGPVPLKDA
LDAALLLTAS RRRAQDIRLT LPQIPPGLRV MAETVRLEQI LVNLIQNAQE ALEGRPDPEI
RITLRDGPVL RLSISDNGPG LSPRIAANLF TPFATSKPEG LGLGLVISQE IARDFGGSLT
AEPSRAGEGA TFHLDLPKAA
|
|---|
| |