| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4743 |
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| Symbol | |
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| ID | 4583246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | + |
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| Start bp | 228171 |
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| End bp | 229892 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639772047 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_918500 |
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| Protein GI | 119387466 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.258371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.341295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTCCTG CCGCGGCTTG GCAGGTGCAT GTCGCGCCGG TAACCGGGGG AACGATTCCG
CTGCCCGGCG ATTATGGGCA GGAAGCATCG CCGATGAAGG AGAAAGCCAT GCGTCACCTG
TCCCTGCTTC TGGCCGCTCT GGTTGCGGCG GGGCCGGCCC TGGCCGAGAA CCGCGGCGTG
GTGGTCGCCA ACGCACGCTA TCAGAACGCG CCGGAGCTGG CCGATGCCGA TGCCAGCGCC
GCCTCCGAGG CGATGAAGGC GGCCGGGTTC CGCACCGTGG CCGGCGCCGA TCTGGCGGTC
AAGGACGTGC GGCAGGCGCT GGCCGACCTG CTGCGGCCCG ACGATTCGCC CGGCGCGCGG
GTGGTGCTGC TGAACGGCCG CTTCCTGCAT GGCGGCAGCG ACAGCTGGTA TATGGGCACG
GATGCCGACA AGCCCGACCT GGTCGGGGCC GGTTCGCAGG GCGTGCCGCT CAGCATGGTG
CTGGACCTGA TGAAGCAGGC GCAGCCGGGC GCGGTGCTGC TGCTCGGCTC GGACGAGGCC
GGGATGGAGC ACGCGGCGGG GCTGGAGAAT GACATCGGCC CGCTGACCCC GCCCGAGGGG
GTGACGGTGA TTTCGGGTCC GCCGGCGGCG ACCAGCGCGG CGGCGGCGGC GCTGCTCAGG
CCCGGCGCAT CGGTCGGCGA GGTGATCGGC GCCGACGACC GGCTGGTCAT GGCCGAGGGC
GGCGATGCGC AACTGGTGCT GGTCGCGGCC GAGGCCAAGG CGGATGCCCC GGCCGGTTCG
CTGGACGCGG ATCGCGACCT TTGGGCCGAG GCGGCGGCCA AGGACACGGC CGATGCCTAT
CGCGGCTATC TGGACCGCTA TCCCAGCGGG ATCTACTCGG CCGCCGCCAA GGCGCGGCTG
GATGCGCTGG GGGCGGCGCA GGCCGACCGC GATCTCTGGG CCGAGGCGGC GGCGGCCAAC
ACCGTCGCGG CCTATGAGGA TTATCTGGCC CGCTATCCCC GCGGCGAGTT CGCCGAGGCC
GCCGAAAGGC GGCTGGCCGA GTTGCGCCCC GCGCCCCCTG CCGCCGAACC CGCGCCCGTG
CAGCCGCGCC AACCCGAGAT CCAGCAGCCC CGCGAGATCG TGCCGCCCCG GCAGGTCTCG
CAGGCCGAGC TGACCGAGAA CCGGCTGAAC CTGTCGCGGG CCAACCGGGT GGCAGTGCAG
CGCCGGCTGA ACGCGCTTGG CTATTCGACC GGCGGCGCGG ACGGGATCTT CGGCTCGCGG
ACCCGCTCGG CCATCCGCGG CTGGCAGCAG CGCAACGGCT ATGCGGTGAC GGGCTATCTG
ACCTCGGCGC AAGTGGGCGC GCTGCGGACG CAGGCCGAGG CGGTGGCGCC CAGTCGCGAC
CAGCAGGACC GCGCCTATTG GCAGCAGACC GGGGCAAAGG GCGGCGCGCG CAACCTGCGC
GCCTATCTGG ACCGCTATCC CGACGGCATC CATGCCCAGA CCGCACGGCA GAGGCTGGCT
GCGCTGAACG GGGACGCACC GCGCGGCGAC CGCGAGGACC GGGCCTGGGC ACGGGCGCGG
CAGGCCGATA CCGTGCAGGC CTATACGCAA TACCTTCAGA ACTGGCCGCG CGGCGAACAT
GCCGAACAGG CCCGCCAGCG CCGCAACCGG CTGATCAACC AGGGCCAGCT GGGCAATGGC
GTCATCGGGC TGGACACGAT CATCCGCGAA CTGGTGAAAT GA
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| Protein sequence | MCPAAAWQVH VAPVTGGTIP LPGDYGQEAS PMKEKAMRHL SLLLAALVAA GPALAENRGV
VVANARYQNA PELADADASA ASEAMKAAGF RTVAGADLAV KDVRQALADL LRPDDSPGAR
VVLLNGRFLH GGSDSWYMGT DADKPDLVGA GSQGVPLSMV LDLMKQAQPG AVLLLGSDEA
GMEHAAGLEN DIGPLTPPEG VTVISGPPAA TSAAAAALLR PGASVGEVIG ADDRLVMAEG
GDAQLVLVAA EAKADAPAGS LDADRDLWAE AAAKDTADAY RGYLDRYPSG IYSAAAKARL
DALGAAQADR DLWAEAAAAN TVAAYEDYLA RYPRGEFAEA AERRLAELRP APPAAEPAPV
QPRQPEIQQP REIVPPRQVS QAELTENRLN LSRANRVAVQ RRLNALGYST GGADGIFGSR
TRSAIRGWQQ RNGYAVTGYL TSAQVGALRT QAEAVAPSRD QQDRAYWQQT GAKGGARNLR
AYLDRYPDGI HAQTARQRLA ALNGDAPRGD REDRAWARAR QADTVQAYTQ YLQNWPRGEH
AEQARQRRNR LINQGQLGNG VIGLDTIIRE LVK
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