Gene Pden_4727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4727 
Symbol 
ID4583230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp213959 
End bp215170 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content69% 
IMG OID639772031 
Productglucose sorbosone dehydrogenase 
Protein accessionYP_918484 
Protein GI119387450 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2133] Glucose/sorbosone dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.635813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.114158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTGC ACCGAGGCCC CTTCGCCATC CTTGCCGCGC TGGTCCTGGC CATGCCGTCG 
GCTGCGCTGG CCGATTTCAA TGCCGATCCG CCCAATGCCA TCGACCAGAG CCCCGCCTTT
GCCGGCCAGA CCCGCGCGCC GGTCATGCCG CAGGCGATGC GTCTGATCCG CACCGTACTG
ACCGAGGATC TGCGCCATCC CTGGGGCATG GCGCTTCTGC CCGATGGCGG GCTGCTGATC
TCCGAACGTC CCGGCCAGTT GCGGCTATAT CGCGATGGCC GGCTGTCCCC GCCGATCAAG
GGCCTCCCCG AGGTCGACGC CCGCGATCAG GGCGGGTTGC TGGACGTGGC CGTCGCCCCC
AACTTTGCCG AGACCCGGCA GGTCTGGTTC AGCTTTTCCG AGCCGCGCGG CAATGGGGAA
AACGGCACGG CGGTCGGCAC CGGCCGACTG TCGCAGGACG AAACCGCGCT GGAGGAGATG
CGGGTGATCT TTCACCAGCA GCCCGGCGTG GAATCGCCGC TGCATTTCGG ATCGCGGCTG
GTCTTGGGGT CGGACGGCTA TCTTTACGTC ACCACCGGCG AGCGCGCGAT CCCGCCCGAG
ACGCCGGTGG CGCAGGACCT GACCAACCAT CTGGGCAAGG TGTTGCGACT GGACCCGGCG
ACAGGCGAGG CGGCGCCAGG CAACCCCCTG GCCGGGGGCG ATGCACAGCC CGAGATATGG
ACCTATGGCC ACCGCAACAT CCAGGCCGCG GCGCTGGACG GGCAGGGCCG GCTCTGGACC
GTCGAGCACG GTCCGATGGG CGGGGATGAA CTGAACCTGC TGGAGCCGGG GCGCAATTAC
GGCTGGCCGG TCATCAGCTA TGGGCTGAAC TACGACGGCA CTCGCGCAGG GCAGGGCCAG
ACCCGGCACG AGGGGATGGA GCAGCCGGTC TATTACTGGG ACCCGGTCAT TGCCCCCAGC
GGCATGGCGT TCTATGAGGG CGCGATGTTT CCCGAGTGGC GTGGCGATGC GCTGATCGGC
GGATTGCAGG CCGGGGCCTT GGTGCGGCTG CGGATCGAGG GCGACCGCGT CACCGGCGAA
CAGCGGCTTG CCCCCGATAT CGGCCGGGTC CGCGATGTCG AGATCGCCCC CGACGGCGCC
GTGCTGGTGC TGATCGACGA CGACCCCGGC AAACTGATCC GCCTGACGCG GCGTGGGGCG
CTGCCGCAAT AG
 
Protein sequence
MILHRGPFAI LAALVLAMPS AALADFNADP PNAIDQSPAF AGQTRAPVMP QAMRLIRTVL 
TEDLRHPWGM ALLPDGGLLI SERPGQLRLY RDGRLSPPIK GLPEVDARDQ GGLLDVAVAP
NFAETRQVWF SFSEPRGNGE NGTAVGTGRL SQDETALEEM RVIFHQQPGV ESPLHFGSRL
VLGSDGYLYV TTGERAIPPE TPVAQDLTNH LGKVLRLDPA TGEAAPGNPL AGGDAQPEIW
TYGHRNIQAA ALDGQGRLWT VEHGPMGGDE LNLLEPGRNY GWPVISYGLN YDGTRAGQGQ
TRHEGMEQPV YYWDPVIAPS GMAFYEGAMF PEWRGDALIG GLQAGALVRL RIEGDRVTGE
QRLAPDIGRV RDVEIAPDGA VLVLIDDDPG KLIRLTRRGA LPQ