Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4725 |
Symbol | |
ID | 4583228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 211902 |
End bp | 212627 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639772029 |
Product | hypothetical protein |
Protein accession | YP_918482 |
Protein GI | 119387448 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.226537 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.100383 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCATCT GGAATACCCT GGCCCGCGCC GATACCGCGG CGGGCGACGA AATCCTGCTG CGCCAGCGCG GCGCCCTTTA CGAGATCCGC TTCAACGGCC TGGAGCTGAT GTCGAACCTC AACCACCAAT CCGAGACCGT GCTGGCCGAG CGCAGCCTGC GCCTGCATGG CCGCAGCGAC GCCCGCGTGC TGATCGGCGG GCTGGGCATG GGCTTTACCC TGCGCGCCGC GCTGGAATTG CTGGGGCCTG CCGCGCAGGT CACGGTCTGC GAGCTGATCC CCCAGATCGC CGGCTGGAAC CGCGACCGCA TCGGCCATCT GGCCGGCCAC CCGCTGCGCG ATCCGCGCGT CACCCTGCGG ATCGCGGATG TGATGGAGGT GCTGCTGGAA CACCGCGCCG CCTTCGACGT GATCCTGATG GATACCGACA ACGGCCCGGA TTTCACCGTG CGCCAGGCGA ACGGCCGGCT TTACGGCGAA GGCGGCCTTG CGGTGCTGCG CAAGGCGCTG CGGCCCGACG GCATCGCCGC CTTCTGGTCC GCCACCGCCT CGGACCCGTT CGAGCGCGTG CTGGACGCCC AGCCCTGGCA TTGGCGGCGC GCCGACATCC AGTTGATCGG CGGGCGGGTC GATGCCTTCC ACCACATTTA CCTGGCCTCG GCCGAGGCCG GGCGGATCGG CCTGCGGGCC TCGCCGGACG CTCTGCCCGC GCTGGCGCTG TCCTGA
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Protein sequence | MPIWNTLARA DTAAGDEILL RQRGALYEIR FNGLELMSNL NHQSETVLAE RSLRLHGRSD ARVLIGGLGM GFTLRAALEL LGPAAQVTVC ELIPQIAGWN RDRIGHLAGH PLRDPRVTLR IADVMEVLLE HRAAFDVILM DTDNGPDFTV RQANGRLYGE GGLAVLRKAL RPDGIAAFWS ATASDPFERV LDAQPWHWRR ADIQLIGGRV DAFHHIYLAS AEAGRIGLRA SPDALPALAL S
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