| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4721 |
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| Symbol | |
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| ID | 4583224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | + |
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| Start bp | 207310 |
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| End bp | 209805 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639772025 |
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| Product | nitrate reductase catalytic subunit |
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| Protein accession | YP_918478 |
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| Protein GI | 119387444 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.068762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0333447 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCT CGCGGCGCGA TCTGCTCAAG GCGCAGGCGG CGGGAATCGC TGCGATGGCC
GCCAATATCC CGCTTTCCGC AGATGCCCAG CCGGTCCCCG GCGGCGTCGA ATCCCTGCAG
ATCACCTGGT CCAAGGCGCC CTGCCGCTTT TGCGGCACCG GCTGCGGCGT CATGGTGGGC
GTCAAGGAGG GCCGGGTCGT CGCCACCCAT GGCGACCTGC TGGCCGAGGT GAACCGGGGC
CTGAACTGCG TCAAGGGCTA TTTCCTGTCC AAGATCATGT ATGGCCAGGA CCGCCTGACC
CAGCCCCTGC TGCGCAAGAA GGACGGGGTC TATGCCAAGG ACGGCGAGTT CACCCCGGTC
AGCTGGGAGG AAGCCTTCGA TACCATGGCC GCGCAGGCCA AGCGGGTGCT GAAGGACAAG
GGACCCACCG CCGTCGGCAT GTTCGGCTCG GGCCAGTGGA CCATCTTCGA GGGCTATGCG
GCAACCAAGC TGATGCGGGC GGGGTTCCGG TCGAACAACC TGGATCCCAA CGCGCGCCAT
TGCATGGCCT CGGCCGCCTA TGCCTTCATG CGGACCTTCG GCATGGACGA GCCGATGGGC
TGCTACGACG ATTTCGAGGC CGCGGACGCC TTCGTGCTCT GGGGCTCGAA CATGGCCGAG
ATGCATCCGA TCCTGTGGAC GCGGGTCGCC GACCGGCGGC TGGGCCACCC GCATGTCAAG
GTGGCGGTGC TGTCCACCTT TACCCATCGC AGCTCGGACC TGGCCGATAT TCCCATCGTC
TTCAAGCCCG GCACCGACCT GGCGATCCTG AACTATATAG CCAACCACAT CATTCAGACC
GGCCGGGTGA ACCGCGATTT CGTGGATCGC CATACCACCT TCGTCGCGGG CGCGACCGGC
ATCGGCTACG GGCTGCGCGA CGACGACCCG CGCGAGGTGG CGGCGCGCAC GGCCGAGGAT
CCGGCGGCGA CCACGCCCTC GACATTCGAG GAATTCGCCG AACTGGTCAG CGAATACACG
CTGGAGAAGG TCTCGGAACT CAGCGGGGTC GAGCCGGGCT TCCTGGAGCA GTTGGCCGAG
CTTTACGCCG ATCCCGACCG CAAGGTCATG TCCTTGTGGA CCATGGGCTT CAACCAGCAT
GTGCGCGGCG TCTGGGCCAA CCAGATGGTC TATAACATCC ACCTGCTGAC CGGAAAGATC
TCCGAGCCGG GCAACAGCCC GTTCTCGCTG ACCGGCCAGC CCTCGGCCTG CGGCACGGCG
CGCGAGGTGG GCACCTTCGC CCATCGCCTG CCGGCCGACA TGACCGTGAC CAATCCCGAG
CACCGCAAGC ATGCCGAGGA GATCTGGCGC ATCCCCCATG GCGTGATTCC GGAAAAGCCG
GGGCTGCATG CGGTGGCGCA GGACCGGGCG CTGCATGACG GCACGCTGAA CTTCTACTGG
ATCCAGGTGA ACAACAACCT GCAAGCCTCG CCCAACAACA GCGGCGAGGC ATGGCCGGGC
TATCGCAACC CCGAGAATTT CATCGTCGTC TCGGACGCCT ATCCCACGGT CACCGCCATG
GCTGCCGACC TGATCCTGCC CGCCGCCATG TGGGTCGAGA AGGAAGGCGC CTATGGCAAT
GCCGAGCGGC GCACCCATGT CTGGCACCAG CTGGTCGAGG CGCCGGGCGA GGCGCGCTCG
GACCTGTGGC AGATGATGGA GTTCTCCAAG CGCTTCACCA CCGACGAGGT CTGGCCCGAA
GAGATCCTGG CCGCCAATCC CAACTATCGC GGCCAGAGCC TGTTCGACGT GCTGTTCCGC
AACGGCAGCG TGGACCGCTT CGACATCTCG GAACTGAGCC CCGACTACGC CAACCAGGAG
GCGAACGATT TCGGCTTCTA CGTCCAGAAG GGCCTGTTCG AGGAATATGC CGCCTTCGGG
CGCGGCCACG GCCACGACCT TGCCCCCTAT GACACCTATC ACGAGGTCCG CGGCTTGCGC
TGGCCCGTGG TGGACGGCAA GGAAACGCTC TGGCGCTATC GCGAGGGGCT GGACCCCTAT
GTCGAGCCGG GCGCCGGCGT GCAGTTCTAT GGCAACCCCG ACGGCAAGGC GCGCATCATC
GCCGTGCCCT ATGAGCCGCC GGCCGAACCG CCGGACGAGG AATACAACAT CTGGCTGGTG
ACGGGCCGGG TGCTGGAGCA TTGGCATTCC GGCTCGATGA CCATGCGCGT GCCCGAGCTT
TACCGGGCCT TCCCCGGCGC CCGCTGCTTC ATGAACCCCG AGGACGCCCG CGACATGGGT
TTCAACCAGG GGGCCGAGGT GCGCATCGTC TCGCGCCGGG GCGAGATCCG CTCGCGCATC
GACACGCGCG GCAGGAACCG GATGCCGCGC GGCGTCATCT TCGTGCCGTG GTTCGATGCC
AGCCAGCTGA TCAACAAGGT GACGCTGGAC GCCACGGATC CCATTTCCAA ACAGACGGAT
TTCAAGAAAT GCGCGGTCAA GATCCTTTCC GTCTGA
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| Protein sequence | MTISRRDLLK AQAAGIAAMA ANIPLSADAQ PVPGGVESLQ ITWSKAPCRF CGTGCGVMVG
VKEGRVVATH GDLLAEVNRG LNCVKGYFLS KIMYGQDRLT QPLLRKKDGV YAKDGEFTPV
SWEEAFDTMA AQAKRVLKDK GPTAVGMFGS GQWTIFEGYA ATKLMRAGFR SNNLDPNARH
CMASAAYAFM RTFGMDEPMG CYDDFEAADA FVLWGSNMAE MHPILWTRVA DRRLGHPHVK
VAVLSTFTHR SSDLADIPIV FKPGTDLAIL NYIANHIIQT GRVNRDFVDR HTTFVAGATG
IGYGLRDDDP REVAARTAED PAATTPSTFE EFAELVSEYT LEKVSELSGV EPGFLEQLAE
LYADPDRKVM SLWTMGFNQH VRGVWANQMV YNIHLLTGKI SEPGNSPFSL TGQPSACGTA
REVGTFAHRL PADMTVTNPE HRKHAEEIWR IPHGVIPEKP GLHAVAQDRA LHDGTLNFYW
IQVNNNLQAS PNNSGEAWPG YRNPENFIVV SDAYPTVTAM AADLILPAAM WVEKEGAYGN
AERRTHVWHQ LVEAPGEARS DLWQMMEFSK RFTTDEVWPE EILAANPNYR GQSLFDVLFR
NGSVDRFDIS ELSPDYANQE ANDFGFYVQK GLFEEYAAFG RGHGHDLAPY DTYHEVRGLR
WPVVDGKETL WRYREGLDPY VEPGAGVQFY GNPDGKARII AVPYEPPAEP PDEEYNIWLV
TGRVLEHWHS GSMTMRVPEL YRAFPGARCF MNPEDARDMG FNQGAEVRIV SRRGEIRSRI
DTRGRNRMPR GVIFVPWFDA SQLINKVTLD ATDPISKQTD FKKCAVKILS V
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