Gene Pden_4710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4710 
Symbol 
ID4583213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp199082 
End bp200662 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content67% 
IMG OID639772014 
Productglucose-methanol-choline oxidoreductase 
Protein accessionYP_918467 
Protein GI119387433 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.467902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0104534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACA ATATGGCGAA ATTCGGGCAT GACGACGCCT CGGTCGTGGT CGTGGTCGGC 
ACCGGCTCGG GCGGCGGCGT GCTGGCCAAC GAACTGGCGC AAAGGGGCGT CAAGGTCGTG
GCGCTGGAGG CCGGCGGGCG CTACCTGCCC GAGGATTACA TCAACGACGA ATGGGACAGC
TTCGCGCAGC TGAGCTGGGG CGACATGCGC ACCACCTCGG GCGACTGGCG GGTGGCGCGG
GACTTTGCCA ACCTGCCGGC CTGGATCGTC AAGGCGGTCG GCGGCACCTC GATCCACTGG
GCCGGCGCAT CGCTGCGCTT CCAGGAACAC GAGTTCAAGG CGCTGACGAC CTATGGCCCG
GTGGACGGCG CCAGCCTGCT GGACTGGCCG ATCACGCTGG CCGACCTGGA GCCCTATTAC
GACCTGGCCG AGAAGAAGCT GGGCGTCACC CGCACCAACG AACTGCCCGG CCTGCCGGGA
AACAACAACT ACCTGGTGCT GGAAAAGGGC GCCAAGGCCG CTGGCTACAG CAAGGTCTCG
ACCGGGCGCA TGGCGATCAA CTCGGTCGAT TACGACGACC GCATGGCCTG CCAGCAGACC
GGCTTCTGCT TCCAGGGCTG CAAATGGGGC GCGAAATGGT CGGCGGCCTA TACCGACATC
CCGCGCGGCG AGGCGACCGG CAACCTCGAG GTTCGCGACC ATAGCCACGC CACCCGGATC
GAGCATGACG ATGACGGCAA GGTCACCGGC GTGCGCTATA TCGACCGGGA CGGGACCGAG
CAGTTCCAGC GCGCCCGCAT CGTCGCCGTC GCCGGCAACT CGATCGAAAG CCCGCGCCTG
CTGCTGGCCT CGGCTTCGGA GCGGTTTCCG GACGGGCTGG CGAACAGTTC GGGCCAGGTC
GGGCGCAACT ACATGCGCCA CACCACCGGC TCGGTCTATG CGATCTTCGA ACGCCCGGTG
CGGATGTGGC GCGGCACCAC CATGGCCGGC ATCGTGCAGG ATGAGGCGCA TCACGACCCC
GCCCGCGGCT TCGTCGGCGG CTATGAGCTG GAGACGCTGG CCCTGGGCAT CCCCTTCATG
GCGGCCTTCA TGGACCCCGG CGGCTGGGGG CGCGAGTTCA CCTCGGCGCT GGACAGCTAT
GAGAACATGG CCGGCATGTG GATCGTGGGC GAGGACCTGC CGCAAGAGAC GAACCGCATC
ACGCTGAACC GCGGCGAAAC CGACCGTTTC GGACTGCCGG TGCCGAATGT GCATTACGAC
GACCATCCCA ACGACATCGC CATGCGCAAT CATGCCTATG CCGCGGGCGA GCGGATCTAT
CGCGCGGCGG GTGCGACGCG GGTGCTGCCG ACGCCGCCCT ACCCCTCGAC CCACAACCTG
GGCACCAACC GCATGTCGGA AAACCCGCGC GACGGGGTGG TGAACAAATG GGGCCAGTCG
CATGACATCC CGAACCTGTT CGTCTCGGAC GGTTCGGTCT TCACCACCTC GGCGGCCGAA
AACCCGACGC TGACCATCGT CGCGCTGGCG ATCCGGCAGG CGGAGCATAT CGCCGCCGAG
ATGGAGAAGG GTGCGCTTTG A
 
Protein sequence
MADNMAKFGH DDASVVVVVG TGSGGGVLAN ELAQRGVKVV ALEAGGRYLP EDYINDEWDS 
FAQLSWGDMR TTSGDWRVAR DFANLPAWIV KAVGGTSIHW AGASLRFQEH EFKALTTYGP
VDGASLLDWP ITLADLEPYY DLAEKKLGVT RTNELPGLPG NNNYLVLEKG AKAAGYSKVS
TGRMAINSVD YDDRMACQQT GFCFQGCKWG AKWSAAYTDI PRGEATGNLE VRDHSHATRI
EHDDDGKVTG VRYIDRDGTE QFQRARIVAV AGNSIESPRL LLASASERFP DGLANSSGQV
GRNYMRHTTG SVYAIFERPV RMWRGTTMAG IVQDEAHHDP ARGFVGGYEL ETLALGIPFM
AAFMDPGGWG REFTSALDSY ENMAGMWIVG EDLPQETNRI TLNRGETDRF GLPVPNVHYD
DHPNDIAMRN HAYAAGERIY RAAGATRVLP TPPYPSTHNL GTNRMSENPR DGVVNKWGQS
HDIPNLFVSD GSVFTTSAAE NPTLTIVALA IRQAEHIAAE MEKGAL