Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4710 |
Symbol | |
ID | 4583213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 199082 |
End bp | 200662 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639772014 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_918467 |
Protein GI | 119387433 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.467902 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0104534 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACA ATATGGCGAA ATTCGGGCAT GACGACGCCT CGGTCGTGGT CGTGGTCGGC ACCGGCTCGG GCGGCGGCGT GCTGGCCAAC GAACTGGCGC AAAGGGGCGT CAAGGTCGTG GCGCTGGAGG CCGGCGGGCG CTACCTGCCC GAGGATTACA TCAACGACGA ATGGGACAGC TTCGCGCAGC TGAGCTGGGG CGACATGCGC ACCACCTCGG GCGACTGGCG GGTGGCGCGG GACTTTGCCA ACCTGCCGGC CTGGATCGTC AAGGCGGTCG GCGGCACCTC GATCCACTGG GCCGGCGCAT CGCTGCGCTT CCAGGAACAC GAGTTCAAGG CGCTGACGAC CTATGGCCCG GTGGACGGCG CCAGCCTGCT GGACTGGCCG ATCACGCTGG CCGACCTGGA GCCCTATTAC GACCTGGCCG AGAAGAAGCT GGGCGTCACC CGCACCAACG AACTGCCCGG CCTGCCGGGA AACAACAACT ACCTGGTGCT GGAAAAGGGC GCCAAGGCCG CTGGCTACAG CAAGGTCTCG ACCGGGCGCA TGGCGATCAA CTCGGTCGAT TACGACGACC GCATGGCCTG CCAGCAGACC GGCTTCTGCT TCCAGGGCTG CAAATGGGGC GCGAAATGGT CGGCGGCCTA TACCGACATC CCGCGCGGCG AGGCGACCGG CAACCTCGAG GTTCGCGACC ATAGCCACGC CACCCGGATC GAGCATGACG ATGACGGCAA GGTCACCGGC GTGCGCTATA TCGACCGGGA CGGGACCGAG CAGTTCCAGC GCGCCCGCAT CGTCGCCGTC GCCGGCAACT CGATCGAAAG CCCGCGCCTG CTGCTGGCCT CGGCTTCGGA GCGGTTTCCG GACGGGCTGG CGAACAGTTC GGGCCAGGTC GGGCGCAACT ACATGCGCCA CACCACCGGC TCGGTCTATG CGATCTTCGA ACGCCCGGTG CGGATGTGGC GCGGCACCAC CATGGCCGGC ATCGTGCAGG ATGAGGCGCA TCACGACCCC GCCCGCGGCT TCGTCGGCGG CTATGAGCTG GAGACGCTGG CCCTGGGCAT CCCCTTCATG GCGGCCTTCA TGGACCCCGG CGGCTGGGGG CGCGAGTTCA CCTCGGCGCT GGACAGCTAT GAGAACATGG CCGGCATGTG GATCGTGGGC GAGGACCTGC CGCAAGAGAC GAACCGCATC ACGCTGAACC GCGGCGAAAC CGACCGTTTC GGACTGCCGG TGCCGAATGT GCATTACGAC GACCATCCCA ACGACATCGC CATGCGCAAT CATGCCTATG CCGCGGGCGA GCGGATCTAT CGCGCGGCGG GTGCGACGCG GGTGCTGCCG ACGCCGCCCT ACCCCTCGAC CCACAACCTG GGCACCAACC GCATGTCGGA AAACCCGCGC GACGGGGTGG TGAACAAATG GGGCCAGTCG CATGACATCC CGAACCTGTT CGTCTCGGAC GGTTCGGTCT TCACCACCTC GGCGGCCGAA AACCCGACGC TGACCATCGT CGCGCTGGCG ATCCGGCAGG CGGAGCATAT CGCCGCCGAG ATGGAGAAGG GTGCGCTTTG A
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Protein sequence | MADNMAKFGH DDASVVVVVG TGSGGGVLAN ELAQRGVKVV ALEAGGRYLP EDYINDEWDS FAQLSWGDMR TTSGDWRVAR DFANLPAWIV KAVGGTSIHW AGASLRFQEH EFKALTTYGP VDGASLLDWP ITLADLEPYY DLAEKKLGVT RTNELPGLPG NNNYLVLEKG AKAAGYSKVS TGRMAINSVD YDDRMACQQT GFCFQGCKWG AKWSAAYTDI PRGEATGNLE VRDHSHATRI EHDDDGKVTG VRYIDRDGTE QFQRARIVAV AGNSIESPRL LLASASERFP DGLANSSGQV GRNYMRHTTG SVYAIFERPV RMWRGTTMAG IVQDEAHHDP ARGFVGGYEL ETLALGIPFM AAFMDPGGWG REFTSALDSY ENMAGMWIVG EDLPQETNRI TLNRGETDRF GLPVPNVHYD DHPNDIAMRN HAYAAGERIY RAAGATRVLP TPPYPSTHNL GTNRMSENPR DGVVNKWGQS HDIPNLFVSD GSVFTTSAAE NPTLTIVALA IRQAEHIAAE MEKGAL
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