Gene Pden_4694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4694 
Symbol 
ID4583197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp187089 
End bp188438 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content67% 
IMG OID639771998 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_918451 
Protein GI119387417 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.809961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.204675 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGAT CAGACGAATT CAGACCCTCT CGCAGGGGCG TGCTGGGCTT TGCGCTTGCC 
GGGGCGGTCA CGGCGGGGTT GGGAACCCGT GCGGCCCAGG CCGCCAGGAT CGCGACCAAG
GCGCGCATCG TCGTCATCGG CGCCGGGGCC GGCGGCACCG CGCTGGTCAA CCGCCTCGTC
CAGCGGCTGG ACGGCGCGCA GATCATCCTG ATCGATCCCA GGCCGCAGCA TTACTATCAG
CCGGGGTTGT CGCTGGTGGC GGCCGGCCTG AAACCCACCG GCTATGTCGT CTCGCGGACC
AGCGAATGGC TGCCCTCGGG CGTGACATTG GTCGCCGAGG CCGCGGTCGC CATCGACCCG
GTGGGCAAGT CCGTCTCGAC CGAGAACGGG CAGAAGCTCG AATACGATTT CCTGGTGGTG
GCGCCGGGGC TGGCGCTGGA TCACGACGCG ATCGAGGGCT TTTCGCTCGA CATGGTGGGC
AAGGACGGGA TCGGTGCGCT TTACGCCGGC CCGGATTACG CGGCCAAGAC CTGGCAGGCG
GCGTGGAAAT TCACCGAGGA AGGCGGCATC GGCCTGTTCA CCCGCCCCGA GACCGAGATG
AAATGCGCCG GCGCGCCGCT GAAGCACACC TTCCTGATCG AGGACATCGC CAGCCGCAGC
GGCGCCAGGG GCAGGTATGA GATGCATTAC GCCTGTCCGC AGACGGCGCT GTTCTCGGTG
CCGATCGTCG CGGAAAAGGT GCGAATGCTG TTCGGGCAGC GCGGCGTCGC CACCCATTAC
AGCCATACGC TGAAATCCAT CGATCCCGGC CGCAAGACGG CACGGTTCGA GACTGCGGCC
ACCGATCCGG CGACGGGCGA ACTCGTCAAG TCCACCGCCG AGATGCCCTA TGACTACCTG
CACGTCATCC CGCCGCAGCG CGCGCCCGCG GTGATCCGGC AGTCGGGCCT TTCCTGGGCC
GACAAATGGA CCGACCAGGG CTGGGTCGAA TGCGACATGA AGACCCTGCG CCATCTGCGC
TATCCCGAGA TCTTCGCGCT CGGCGATGTG GCGGGGGTGC CCAAGGGCAA GACCGCGGCC
TCGGTGAAAT GGCAGGTTCC GGTGATCGAG GACCATCTGG TCGCCGCCAT CGAGGGCCGC
GAGGGGACCG CGATCTATGA CGGCTACACC TCCTGCCCGC TGATCACCCG CGTCGGACGG
GCCATGCTGG TCGAGTTCGA CTATCACAAC AACCTGGTGC CCTCGTTCCC CGGCGTCATC
GCCCCGCTGG AGGAATTGTG GATCAGCTGG CTGATGAAGG AAGTGGCGCT GAAGGCCACC
TACAACGCCA TGCTGCGCGG CCGGGCCTGA
 
Protein sequence
MTGSDEFRPS RRGVLGFALA GAVTAGLGTR AAQAARIATK ARIVVIGAGA GGTALVNRLV 
QRLDGAQIIL IDPRPQHYYQ PGLSLVAAGL KPTGYVVSRT SEWLPSGVTL VAEAAVAIDP
VGKSVSTENG QKLEYDFLVV APGLALDHDA IEGFSLDMVG KDGIGALYAG PDYAAKTWQA
AWKFTEEGGI GLFTRPETEM KCAGAPLKHT FLIEDIASRS GARGRYEMHY ACPQTALFSV
PIVAEKVRML FGQRGVATHY SHTLKSIDPG RKTARFETAA TDPATGELVK STAEMPYDYL
HVIPPQRAPA VIRQSGLSWA DKWTDQGWVE CDMKTLRHLR YPEIFALGDV AGVPKGKTAA
SVKWQVPVIE DHLVAAIEGR EGTAIYDGYT SCPLITRVGR AMLVEFDYHN NLVPSFPGVI
APLEELWISW LMKEVALKAT YNAMLRGRA