Gene Pden_4693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4693 
Symbol 
ID4583196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp185444 
End bp186895 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content67% 
IMG OID639771997 
Producturacil-xanthine permease 
Protein accessionYP_918450 
Protein GI119387416 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID[TIGR00801] uracil-xanthine permease 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.210372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTCT CAACATATCT GAAAGGCCGT GCTTCGCCTG CGTGGCACTT GGTCGCAGCC 
GGCGGATGCG GCTCTGCCCC GGGGCAGGCC GGTTGCGCCA TCGCGCGTTG CCACTGGCAT
TTTTCCGCAA AGCCGCCCAA AAGCCTGTCC ACGCAACCGA ATCCGAGAGA CGTGATGGGC
TATTTTCCTG ACTGGCGCCC CGCCGCGGGC GCCACGGTGC TACCCGATGA AAAGCTGCCG
CTGACCCAGG CGGTGCCGAT GAGCCTGCAG CACCTGCTGG CGATGTCCGG TTCGACCATC
CTGGCGCCGC TGATCATGGG GTTCGATCCC AATGTCGCGG TGTTCTTTTC CGGCATCGGC
ACGCTGCTGT TCTTTGCCGT GACCGGCGGG CGGGTGCCCA GCTATCTCGG CTCGTCCTTC
GCCTTCATCG CTGTCATCAT GGCGGCGACC GGCTTTGCCG GCGGCGGGCC GAACCCCAAT
ATCGCCGTGG CGCTTGGCGG CATCATCGCC GCCGGCCTGA TCTATGCGCT GATCGGACTG
GTCGTCATGG CCATCGGCAC GGGCTGGGTC GAAAGGCTGA TGCCGCCGGC GGTGACCGGG
GCGATCGGCA TGTCCATCGG ACTGAACCTC GCCCCGGTGG CGGTCAAGCA GCTTGCCGGC
AGCCATGCCC ATCTGAGCAT CGCCCTGGCG ACCGTGCTGT GCATGGCGCT GGTCTCGGTC
TATGGCCGGC AGGCAACGCG CCGGATCGCG GTGCTGATCG CGCTGCTGTT CGGCTATGCG
CTGGTGCTGA TCCTCGGCAA CGGGCTGGGG CTGGTGCCGG GGATCGAGTT CGCCGCCGTC
GCTGCCGCGC CCTGGTTCGG CGTGCCGAAC TTCGTCACGC CGCGATTCGA ATGGTCGGCC
ATCACCCTGA TCGCCCCCGT CGCCATCGTG CTGGTGGCCG AGAACCTGGG CCATATCAAA
GCCCTGGGCG CGATCACCGG GCAGAGCATG GACCGCTATA TCGGCCGGGG ATTCCTGGGC
GACGGCCTGG CAACCATGCT GGCCGGGACG GGCGGCGGCA CGGGCGTCAC CACCTATGCC
GAGAATATCG GCGTCATGGC CATGACCCGG GTCTATTCGA CGCTGATCTT CCCGATGGCC
GCCGCCATCG CGATCTTCCT GGGCCTGTCG CCGAAATTCG GCGCCATCCT GCAAACCATC
CCGGCGCCGG TGCTGGCGGG GCTTGCGGTG TCGGTCTTCG GCCTGATCGC CTCGGCCATG
GCGCGGATCT GGGTGGACAA CAAGGTCGAT TTCTCGGACC CGCGCAACCT GTTCACCGTG
GGGGTGGCGC TGATCCTTGG CGCCGGCGAT TTCACCGTCA CCATCGGCAG CTTCGCGCTG
GGGGGCATCG GCACCTCGAC CTTTGCGGCC TTGCTGCTGT ATCAACTGCT GGGGATCGGC
CGGCGACAGT GA
 
Protein sequence
MNVSTYLKGR ASPAWHLVAA GGCGSAPGQA GCAIARCHWH FSAKPPKSLS TQPNPRDVMG 
YFPDWRPAAG ATVLPDEKLP LTQAVPMSLQ HLLAMSGSTI LAPLIMGFDP NVAVFFSGIG
TLLFFAVTGG RVPSYLGSSF AFIAVIMAAT GFAGGGPNPN IAVALGGIIA AGLIYALIGL
VVMAIGTGWV ERLMPPAVTG AIGMSIGLNL APVAVKQLAG SHAHLSIALA TVLCMALVSV
YGRQATRRIA VLIALLFGYA LVLILGNGLG LVPGIEFAAV AAAPWFGVPN FVTPRFEWSA
ITLIAPVAIV LVAENLGHIK ALGAITGQSM DRYIGRGFLG DGLATMLAGT GGGTGVTTYA
ENIGVMAMTR VYSTLIFPMA AAIAIFLGLS PKFGAILQTI PAPVLAGLAV SVFGLIASAM
ARIWVDNKVD FSDPRNLFTV GVALILGAGD FTVTIGSFAL GGIGTSTFAA LLLYQLLGIG
RRQ