| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4692 |
|---|
| Symbol | |
|---|
| ID | 4583195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | - |
|---|
| Start bp | 184654 |
|---|
| End bp | 185334 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639771996 |
|---|
| Product | phosphatidylserine decarboxylase |
|---|
| Protein accession | YP_918449 |
|---|
| Protein GI | 119387415 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0688] Phosphatidylserine decarboxylase |
|---|
| TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.177779 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATGC GCGACACTTT CATCAAGCCC ATGCACCGCG AGGGCATCCG CTTCGTGGCG
ATCTTCGCCG CCGTGACGCT GGTGCTGTTC CTGATCTGGG AGCCGCTGGG CTGGATCGGG
GTCGGCCTGA CCGTCTGGTG CTATTACTTC TTTCGCGACC CCGAGCGGGT GACGCCCGCG
CGCCCCGGGC TGATCGTCAG CCCCGCGGAT GGCGTGGTCT CGCTGATCGA GCCGGCGGTG
CCGCCGGCCG AACTGGGCAT GGCCGACGCG CCCCTGACCC GGGTCAGCGT GTTCATGAGC
GTGTTCAACT GCCATGTGAA CCGCAGCCCT ATCGCCGGCG AGGTGGTTTC GGTCGCCTAT
CGGCCGGGCA AGTTCTTCAA CGCCTCGCTG GACAAGGCCA GCGTGGACAA TGAACGCAAC
GGGCTGCGCA TCCGCATGGA TGACGGGCGC GACCTGGCGG TGGTGCAGAT CGCCGGCCTC
GTGGCCCGCC GGATCGTCTG TTTCGTGAAG CCCGGCGACC GGCTGCGCAC GGGCGAACGG
TTCGGCCTGA TCCGCTTCGG CTCGCGGCTG GACGTCTACC TGCCGCCGGG CGTGGTGCCG
CTGGTCGAGA TCGGCCAGAC CATGGTCGCG GGCGAGACGG TGATCGCCGA ACTGGCGCAG
GCCGGGCAGG CGGAGGCGTG A
|
|---|
| Protein sequence | MRMRDTFIKP MHREGIRFVA IFAAVTLVLF LIWEPLGWIG VGLTVWCYYF FRDPERVTPA
RPGLIVSPAD GVVSLIEPAV PPAELGMADA PLTRVSVFMS VFNCHVNRSP IAGEVVSVAY
RPGKFFNASL DKASVDNERN GLRIRMDDGR DLAVVQIAGL VARRIVCFVK PGDRLRTGER
FGLIRFGSRL DVYLPPGVVP LVEIGQTMVA GETVIAELAQ AGQAEA
|
|---|
| |