Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4687 |
Symbol | |
ID | 4583190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 181069 |
End bp | 182181 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639771991 |
Product | ABC-2 type transporter |
Protein accession | YP_918444 |
Protein GI | 119387410 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.696171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.325536 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCTGC GCAACGTCTG GAACCTGGGC ATCAAGGAAC TGCGCGGGCT GTGGCGCGAC CCGGCGATGC TGCTCTTGAT CGTCTATGCC TTCTCGTTGT CGATCTATAC CGAGTCGAAG GCGATGCCGG AAAGCCTGTC CAACGCTGCC ATCGCCGTCG TGGACGAGGA CCGCTCGGCG CTTTCCGAAC GCATCGTTTC GGCCTTTACC CCGCCCTATT TCGGCACGCC GCGGCTGATC ACCACCACCC AGATGGACCG GCGCATGGAC GAGGGGCTGG ATACGTTCGC GCTGGACATT CCGCCCGATT TCCAGCGCGA CCTATTGGCC GGCCGCCATC CCGCGATCCA GCTGAACGTC GATGCCACCC GGATGAGCCA GGCGTTTACC GGCAGCGGCT ATGTCCAGCA GATCGTGACG GCCGAGGTCT CGGAGTTCCT GGCCGGACAT CGCGAGGAAA CCGCCCTGCC CGTCGAACTG GCGCTGCGGG CGCGCTACAA TCCCTCGCTG GACGCGGGCT GGTTCGGCGC GATCAACAGC GTCATCGATG CCGTCACCAT GCTGTCGATC ATCCTGACCG GCGCGGCGTT GATCCGCGAA AAGGAGCATG GCACGGTCGA GCATCTGCTG GTCATGCCGG TGACCGCGGC CGAGATCATG CTGTCCAAGA TCTGGTCCAT GGGGCTTGTG GTGCTGCTGG CGTCAAGCTT TGCGATCACG GTGGTCGTGC AGATGGCCTT GCAGGTGCCG GTGGCGGGAT CGGTGCCGCT GTTCATCGCG GCGGCGGCGC TGATGCTGTT CGCAACCACC TCGATGGGCA TCTTCCTGGC CACCATGGCC GGGTCGATGC CGCAATTCGG GCTGCTGTTG ATGCTGGTGC TGTTTCCCTT GCAGGTGCTC TCCGGCGGCA TGACCTCGCG CGAAAGCATG CCCGACATCA TCCAGGCGCT GATGTCGCTG GCGCCCAACA CCCATTTCGT CATCCTGTCG CAAGGCATCC TGTTCCGGGG CGCGGGGCTG GGCGTGGTCT GGCCGCAGCT TCTGGCGCTG GCCGTCATCG GCTGCGTGCT GTTCTGGCTG GCACTGCGGC AATTCCGCCG CTTCCTGGCC TGA
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Protein sequence | MRLRNVWNLG IKELRGLWRD PAMLLLIVYA FSLSIYTESK AMPESLSNAA IAVVDEDRSA LSERIVSAFT PPYFGTPRLI TTTQMDRRMD EGLDTFALDI PPDFQRDLLA GRHPAIQLNV DATRMSQAFT GSGYVQQIVT AEVSEFLAGH REETALPVEL ALRARYNPSL DAGWFGAINS VIDAVTMLSI ILTGAALIRE KEHGTVEHLL VMPVTAAEIM LSKIWSMGLV VLLASSFAIT VVVQMALQVP VAGSVPLFIA AAALMLFATT SMGIFLATMA GSMPQFGLLL MLVLFPLQVL SGGMTSRESM PDIIQALMSL APNTHFVILS QGILFRGAGL GVVWPQLLAL AVIGCVLFWL ALRQFRRFLA
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