Gene Pden_4687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4687 
Symbol 
ID4583190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp181069 
End bp182181 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content65% 
IMG OID639771991 
ProductABC-2 type transporter 
Protein accessionYP_918444 
Protein GI119387410 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.696171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.325536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTGC GCAACGTCTG GAACCTGGGC ATCAAGGAAC TGCGCGGGCT GTGGCGCGAC 
CCGGCGATGC TGCTCTTGAT CGTCTATGCC TTCTCGTTGT CGATCTATAC CGAGTCGAAG
GCGATGCCGG AAAGCCTGTC CAACGCTGCC ATCGCCGTCG TGGACGAGGA CCGCTCGGCG
CTTTCCGAAC GCATCGTTTC GGCCTTTACC CCGCCCTATT TCGGCACGCC GCGGCTGATC
ACCACCACCC AGATGGACCG GCGCATGGAC GAGGGGCTGG ATACGTTCGC GCTGGACATT
CCGCCCGATT TCCAGCGCGA CCTATTGGCC GGCCGCCATC CCGCGATCCA GCTGAACGTC
GATGCCACCC GGATGAGCCA GGCGTTTACC GGCAGCGGCT ATGTCCAGCA GATCGTGACG
GCCGAGGTCT CGGAGTTCCT GGCCGGACAT CGCGAGGAAA CCGCCCTGCC CGTCGAACTG
GCGCTGCGGG CGCGCTACAA TCCCTCGCTG GACGCGGGCT GGTTCGGCGC GATCAACAGC
GTCATCGATG CCGTCACCAT GCTGTCGATC ATCCTGACCG GCGCGGCGTT GATCCGCGAA
AAGGAGCATG GCACGGTCGA GCATCTGCTG GTCATGCCGG TGACCGCGGC CGAGATCATG
CTGTCCAAGA TCTGGTCCAT GGGGCTTGTG GTGCTGCTGG CGTCAAGCTT TGCGATCACG
GTGGTCGTGC AGATGGCCTT GCAGGTGCCG GTGGCGGGAT CGGTGCCGCT GTTCATCGCG
GCGGCGGCGC TGATGCTGTT CGCAACCACC TCGATGGGCA TCTTCCTGGC CACCATGGCC
GGGTCGATGC CGCAATTCGG GCTGCTGTTG ATGCTGGTGC TGTTTCCCTT GCAGGTGCTC
TCCGGCGGCA TGACCTCGCG CGAAAGCATG CCCGACATCA TCCAGGCGCT GATGTCGCTG
GCGCCCAACA CCCATTTCGT CATCCTGTCG CAAGGCATCC TGTTCCGGGG CGCGGGGCTG
GGCGTGGTCT GGCCGCAGCT TCTGGCGCTG GCCGTCATCG GCTGCGTGCT GTTCTGGCTG
GCACTGCGGC AATTCCGCCG CTTCCTGGCC TGA
 
Protein sequence
MRLRNVWNLG IKELRGLWRD PAMLLLIVYA FSLSIYTESK AMPESLSNAA IAVVDEDRSA 
LSERIVSAFT PPYFGTPRLI TTTQMDRRMD EGLDTFALDI PPDFQRDLLA GRHPAIQLNV
DATRMSQAFT GSGYVQQIVT AEVSEFLAGH REETALPVEL ALRARYNPSL DAGWFGAINS
VIDAVTMLSI ILTGAALIRE KEHGTVEHLL VMPVTAAEIM LSKIWSMGLV VLLASSFAIT
VVVQMALQVP VAGSVPLFIA AAALMLFATT SMGIFLATMA GSMPQFGLLL MLVLFPLQVL
SGGMTSRESM PDIIQALMSL APNTHFVILS QGILFRGAGL GVVWPQLLAL AVIGCVLFWL
ALRQFRRFLA