Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4686 |
Symbol | |
ID | 4583189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 178334 |
End bp | 181072 |
Gene Length | 2739 bp |
Protein Length | 912 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639771990 |
Product | ABC transporter related |
Protein accession | YP_918443 |
Protein GI | 119387409 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.248247 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCC TGCCCGACCA GCCCGATGGC CCGCCCGTGG CCGAGATCGC CGGGGTCTCG CTGCGCTATC GCAGGGTTGT GGCGCTGGAC GGGGTGTCGC TGGCGGTCCC CGCCGGCTGC ATGGTCGGGT TGATCGGTCC CGACGGCGTC GGCAAGTCCA GCCTGCTCTC GCTGATCGCC GGCGCGCGGG TGATCCAGCA GGGCCAGATC CGCGTGCTTG GCGGCGACAT GGCCGACGCG CATCACCGCG CCCGGATCTG CCCGCGCATT GCCTATATGC CGCAGGGGCT GGGCCGGAAC CTCTATCCTA CGCTTTCGGT GGCCGAGAAT CTGGATTTCT TCGGCCGGCT TTTCGGCCAC GGCGCGGCCG AGCGTGCGCG CCGCATCGAC GCGCTTCTGG CCGCGACCGG CATGTCGCCG TTTCGCGACC GGCCGGCGGC CAAGCTTTCG GGCGGGATGA AGCAGAAGCT GGGCCTGTGC TGCGCGCTGA TCCACGACCC CGACCTGCTG ATCCTGGACG AGCCGACCAC CGGCGTCGAT CCGCTGTCCC GCCGCCAGTT CTGGGAGCTG ATCGCGCGCA TCCGCCGCGA CCGCCCGGGC ATGAGCGTGA TCGTGGCGAC CGCCTATATG GAAGAGGCCG CCGGCTTCGA CTGGCTGGTG GCGATGGATG GCGGCCGGGT GCTGGCCACC GGCAGCCCGG CCGAGTTGCT GGAGCGCACC GGGGCCGAGG ATCTGGACCG CGCCTTCATC GCGCTCTTGC CCGACAGCGA AAGGCGCGGG CACGAGCCGG TCTCGATCCC GCCGCGCCGG GCCGAGGACG GCGAGCCCGC CATCGAGGCG CGGCACCTGA CCATGCGCTT CGGCGATTTC ACCGCCGTCG ACGATGTCAG CTTCCGCATC GGCAAGGGCG AGATCTTCGG CTTTCTCGGC TCGAACGGCT GCGGCAAGAC CACGACGATG AAGATGCTGA CCGGGCTCTT GCAACCCAGC GAGGGCACGG CACGGCTGTT CGGCGTCGAA CTCGATCCTT CGGACATGGC GGTGCGCCGC CGGGTCGGGT TCATGAGCCA GTCCTTCTCG CTTTATTCCG AACTGACGGT GCGGCAGAAC CTCGAGTTGC ACGCGCGCCT TTTCGGCATG GAGGCCGGGG CGATCCCGGA TCGCGTCCGG CAGATGATCG AGCGCTTCGG CCTGGCCGCC GTGGCGGACG ACCTGCCCGA TGCGCTGCCG CTGGGTATCC GCCAGCGCCT GTCCTTGGCC GTCGCTATGA TCCACGGCCC CGAGATCCTG ATCCTGGACG AGCCGACCTC GGGCGTCGAT CCGGTGGCGC GCGATGGCTT CTGGCGCATG CTGGGCGAGC TGTCGCGCCA GGACGGGGTG ACGATCTTCG TCTCGACCCA TTTCATGAAC GAGGCCGAGC TTTGCGACCG CATCTCGCTG ATGCATGCCG GTCGCGTGCT GGTCAGCGAC ACGGCCGAGG CGATCAAGCG GGCCAAGGGA GCGGCTACGC TGGACGACGC CTTCGTCGCC TATCTGCAAG AGGCGATCGG CGATGAGCCC CCGCCCACGC GCCTCGCCGA TGCGACCGAG ACGGCCGCGC GGCCGGGCGG CTGGTTCAGC CCGGCGCGCA TGCTCAGCTA TTCCCGGCTG GAATCGCTGC AACTCATGCG CGATCCGATC CGGCTGACGC TGGCGCTGAT CGGCAGCCTG ATCCTGATGT TCGTCATCGG CTACGGCATC AACATGGATG TCGAGGACCT GAGCTTCGCC GTGCTCGACC GCGACCGGAC CACGACCTCG CGCGACTATG TTCTGGACAT CGCCGGTTCG CGCTATTTCA CCGAAACCGC GCCCTTGGCG GATTACGACG ACATGGACGC GCGCATGCGC ACCGGCCGGC TTGCGCTGGC CATCGAGATC CCGCCCGGCT TTGCCCGCGA CCTGGTGCGC GGCGGTGCCG TGCAGGTCGG TGCCTGGATC GACGGCGCCA ACCCGACCCG GGCCGAGACC GTGCGCGGCT ATGTGCAGGG CATGCATGCC GACTGGATCA TGCGCAAGAC GCGCGAGGCC CATGGCGAGG CGGCGGTGCA GGGCGCCTTC GAGTTGGTGA CGCGCTTTCG CTACAACCCC GACGTGAAAA GCATCGTCGC GATGGTGCCG GCGGTGATCC CGCTGCTTTT GCTGCTGATC CCGGCGGTGC TGACCACGCT CAGCGTCGTG CGCGAAAAGG AACTGGGCTC GATCATCAAT TTCTACGTCA CTCCGGTCAC GCGGCTGGAA TTCCTGATCG GCAAGCAATT GCCCTATGTG GCGCTGGCCA TGCTGAATTT CGCGCTGATG ACGGCTTTTG CGGTCTTTGC GTTCCGCGTG CCCTTCACCG GCAGCCTGAC GGCCTTTGCG CTGGCCGCGC TGCTTTATGT CGGCGCCACC ACGGCCATGG GGCTGCTGAT CTCGTCCTTC ATGCGCAGTC AGGCGGCGGC GCTGTTCGCC ACCGTGCTGC TGACCATGAT CCCCGGCGCA CAATATTCCG GGCTGCTCGA CCCGGTTTCC TCGCTGCAAG GCGTGGGCCG CGCCATCGGC GAGGTCTATC CGACGACGCA TTTCATCATC GCCTCGCGCG GGGCCTTTTC CAAGGGGCTG GGCTTTGCCG ACCTGGGCAT GGCCTTCGCG GCACTGGCGG CGGCCGTTCC GATCATCCTG GGGCTCAGCG CCCTGCTGCT GAGGAAACAG GCGAAATGA
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Protein sequence | MTALPDQPDG PPVAEIAGVS LRYRRVVALD GVSLAVPAGC MVGLIGPDGV GKSSLLSLIA GARVIQQGQI RVLGGDMADA HHRARICPRI AYMPQGLGRN LYPTLSVAEN LDFFGRLFGH GAAERARRID ALLAATGMSP FRDRPAAKLS GGMKQKLGLC CALIHDPDLL ILDEPTTGVD PLSRRQFWEL IARIRRDRPG MSVIVATAYM EEAAGFDWLV AMDGGRVLAT GSPAELLERT GAEDLDRAFI ALLPDSERRG HEPVSIPPRR AEDGEPAIEA RHLTMRFGDF TAVDDVSFRI GKGEIFGFLG SNGCGKTTTM KMLTGLLQPS EGTARLFGVE LDPSDMAVRR RVGFMSQSFS LYSELTVRQN LELHARLFGM EAGAIPDRVR QMIERFGLAA VADDLPDALP LGIRQRLSLA VAMIHGPEIL ILDEPTSGVD PVARDGFWRM LGELSRQDGV TIFVSTHFMN EAELCDRISL MHAGRVLVSD TAEAIKRAKG AATLDDAFVA YLQEAIGDEP PPTRLADATE TAARPGGWFS PARMLSYSRL ESLQLMRDPI RLTLALIGSL ILMFVIGYGI NMDVEDLSFA VLDRDRTTTS RDYVLDIAGS RYFTETAPLA DYDDMDARMR TGRLALAIEI PPGFARDLVR GGAVQVGAWI DGANPTRAET VRGYVQGMHA DWIMRKTREA HGEAAVQGAF ELVTRFRYNP DVKSIVAMVP AVIPLLLLLI PAVLTTLSVV REKELGSIIN FYVTPVTRLE FLIGKQLPYV ALAMLNFALM TAFAVFAFRV PFTGSLTAFA LAALLYVGAT TAMGLLISSF MRSQAAALFA TVLLTMIPGA QYSGLLDPVS SLQGVGRAIG EVYPTTHFII ASRGAFSKGL GFADLGMAFA ALAAAVPIIL GLSALLLRKQ AK
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