| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4685 |
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| Symbol | |
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| ID | 4583188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | + |
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| Start bp | 177048 |
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| End bp | 178337 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639771989 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_918442 |
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| Protein GI | 119387408 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.189935 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCGGA CCGGCCGGAA GGGGCGGCGC AGGAAAGCTC GCCATGCCCG GCAAACTGTC
CCTTTGGCGC ATTTGCCGCA TCAGGCGCCA ATGTCCGCGC CCCAACGACA ACCTGCACTT
TCATCAAGGA AAACGCAGCC CATGGGGGCT ATGGTGGCCT CGCGCGGTGA TTCGCGCTCC
CGGCCAGGGC CGGGTATCTA CCGATCGCGG AGGTCATGCA TGGCGGGCAA GGCAAGATCC
TGGTGGGGCG GGGCCGCGGC TGTCGCCGTT CTGGCCGTCG TCGGCTGGTT GGCCTGGCAG
AACCTGTCGC AGGACGGCCA GCTTGCCGGC ATCGCCTCGG GCAATGGCCG GATCGAGGCG
ACCGAGATCG ACATCTCGGC CCTTTCCGCC GGGCGCATCG CCCGCATCCA GGCGGCCGAG
GGCCAGGTCG TGCGCAAGGG CGCGGTGCTG GTGCAGATGG ACACCTTGCA GCTCGACGCG
CAGAAGCGGC AGGCCGAGGC GCAGCTGCGC CGCGCCCGCA TCGGGGTCGA GACCGCACAG
AGCCTCGTGA CCCAGGCCGA GGCGCAGCAC AAGGCCGCCG GGGCCGCCGT CGAGCAGGCG
CAGGCAGCGG CGGATGCGGC CGCGGCCCGG TTGGCGCGGA CGGAAAGACT GGCGCGCAGC
AATGTCGCCT CGCAGCAGGT GCTGGACGAT GTGCGGGCCT CGGGACGCGA GACGCAGGCG
GCGCTGGCCT CGGCCGAGGC CAACCTGGCC GCCGCCGAGG CCGGGATCGG CACCGCCCGC
GCCCAGGTGG TCGATGCCGA GGCGGCGGTG GACGCGGCGC AGGCGGCGAT CGAGGCCATC
GAGGTGCAGA TCGACGACGC CACGCTGCAA TCGCCGCGCG ACGGCCGGGT GCAATATCTC
ATCGCGCAAG AGGGCGAGAT CGTCGCGGCC GGCGGGCGCA TCCTGAACCT GGTCGATCTG
GAGGATGTCT ACATGACCTT CTTCCTGCCC ACCTCGCAGG CCGGCCGGGT CGAGGTCGGG
GCCGAGGCGC GGCTGGTGAT GGATGCCGCC CCGCAATATG TGATCCCGGC GCGGATTTCC
TATGTCGCGG ATGTGGCGCA GTTCACGCCC AAGACCGTCG AGACCGCCGA GGAACGCGAA
AAACTGATGT TCCGCGTCCG CGCCCAGGTC GACCCCGAGC TGCTGCGCAA ATACAGCAAC
TACGTCAAGA CCGGCCTGCC CGGCACGGCT TATGTCCGCA TCGACACCGA GGCCGGCTGG
CCCGACACGC TGTCCAATCT GGTAGAATGA
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| Protein sequence | MPRTGRKGRR RKARHARQTV PLAHLPHQAP MSAPQRQPAL SSRKTQPMGA MVASRGDSRS
RPGPGIYRSR RSCMAGKARS WWGGAAAVAV LAVVGWLAWQ NLSQDGQLAG IASGNGRIEA
TEIDISALSA GRIARIQAAE GQVVRKGAVL VQMDTLQLDA QKRQAEAQLR RARIGVETAQ
SLVTQAEAQH KAAGAAVEQA QAAADAAAAR LARTERLARS NVASQQVLDD VRASGRETQA
ALASAEANLA AAEAGIGTAR AQVVDAEAAV DAAQAAIEAI EVQIDDATLQ SPRDGRVQYL
IAQEGEIVAA GGRILNLVDL EDVYMTFFLP TSQAGRVEVG AEARLVMDAA PQYVIPARIS
YVADVAQFTP KTVETAEERE KLMFRVRAQV DPELLRKYSN YVKTGLPGTA YVRIDTEAGW
PDTLSNLVE
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