Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4682 |
Symbol | |
ID | 4583185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 174512 |
End bp | 175090 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639771986 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_918439 |
Protein GI | 119387405 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.706561 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCGAC CCGCTTGGCA GCCCCAGAGC CGGGATTACG ACAGCCTCGG TTTCCAGAAC GCCCCCGATG CGACGCTGGT CCTGGTCGAC CGGGTGATCG TCCGGGCCAG CCTGATGGTC GAGGCGGTCT TCGGCTGGAC CCCGCAGGAG CTGGAGGGGC AGTCCATGCG TTGCCTTTAC CCGGGCCAGA CCGATTTCGA CCTGGTCGGC GAACGTGCGC GCAAGGCGCT GCGGGAGCGG CCGTTCTATC GGGACGAACG CTTCATGCGG CGCAAGGACG GCCGCATCCT GTGGATGGAG GGCAGGGGGC GGACCATGGA TCAAGACGAC CCGCACCGCC TGGCGATCTG GACCTATCGG CCGCTGGAGG CCGCGGTCGG TGCCGGCAGC CTGCTGACGG CGACGGAGAA GCGCATCGCC GGTTATCTGG TCAACGGCTT TACCAGCAAG GAGATCGCCA AGTCGCTGGG CTGTTCGCCG CGCACGGTCG AGGTCCACCG CGCCAACATG ATCCGCAAGA CGGGGGTGCG GAACAGCTTC GAACTGGTCC GGCGGTTGCT CGACATCGGT GCAGGCTGA
|
Protein sequence | MQRPAWQPQS RDYDSLGFQN APDATLVLVD RVIVRASLMV EAVFGWTPQE LEGQSMRCLY PGQTDFDLVG ERARKALRER PFYRDERFMR RKDGRILWME GRGRTMDQDD PHRLAIWTYR PLEAAVGAGS LLTATEKRIA GYLVNGFTSK EIAKSLGCSP RTVEVHRANM IRKTGVRNSF ELVRRLLDIG AG
|
| |