| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4664 |
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| Symbol | |
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| ID | 4583167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008688 |
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| Strand | - |
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| Start bp | 156075 |
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| End bp | 156881 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639771968 |
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| Product | shikimate dehydrogenase |
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| Protein accession | YP_918421 |
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| Protein GI | 119387387 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCGC GCGATCTGAC CGAAATCACC GGCAAGACCC GGGTTCTGGG CATCCTTGCC
GACCCTATCG GCCATGTGAA GGCTCCGCCC GGCATCAACG CCATCGCCAT CCGGCGCGGC
CGCGATGCGG TGATGGTGCC GTTGCAGGTC GCACCCGAGG ATCTGGCCCA ATTCGCCGAT
GCGTTGCGAA AGCTGAAAAG CTATGACGGC GGCATCGTGA CGGTGCCGCA CAAGGGGGCC
ATGGCCGGCA TCTGCGACGA GATCACGCCG CGCGCCCGGA TGATGGGCGC GGTGAACGTG
ATCCGGCGCG AGGACGACGG ACGGCTGGTC GGCGACATGC TGGACGGGGC GGGCTTCATC
GCCGGGCTGG AATCGCAGGG CATCACCGTC GCGAACCGGC GCGTTTATCT GGTCGGCGCC
GGCGGCGCGG CCAGCGCCAT CGCCTTTGCC ATGGCCGAGG CGGGCGTGGC ACATCTGACG
CTGGCCAATC GCACCACCGC CAAGGCGCAA GAGCTTTGCG ACCGCATCCG CGCCGCCTTT
CCCGAATCCT CGGTCGCGGT CGGCGACGCC AACCCCTCGG GACATGACAT CGTCGTCAAC
GGCACCTCGC TGGGGATGCG GCCGGGCGAC GCGATCCCGC TGGATGTCGC GGGACTGGCC
CCCGGCATGG TCGTGGCCGA GGTCATCATG GAGCCGGAGA TCACCCCGCT TCTGGCCGAG
GCACAGGCGC GCGGCTGCCG CATCCACCTG GGCAAGCCCA TGCTGGAGCA GCAGCTTGAA
CTGATGGCCA GCTTCTTCAA GCTGTAA
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| Protein sequence | MSARDLTEIT GKTRVLGILA DPIGHVKAPP GINAIAIRRG RDAVMVPLQV APEDLAQFAD
ALRKLKSYDG GIVTVPHKGA MAGICDEITP RARMMGAVNV IRREDDGRLV GDMLDGAGFI
AGLESQGITV ANRRVYLVGA GGAASAIAFA MAEAGVAHLT LANRTTAKAQ ELCDRIRAAF
PESSVAVGDA NPSGHDIVVN GTSLGMRPGD AIPLDVAGLA PGMVVAEVIM EPEITPLLAE
AQARGCRIHL GKPMLEQQLE LMASFFKL
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