| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4654 |
|---|
| Symbol | aphA |
|---|
| ID | 4583157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | + |
|---|
| Start bp | 143841 |
|---|
| End bp | 144527 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639771958 |
|---|
| Product | acid phosphatase/phosphotransferase |
|---|
| Protein accession | YP_918411 |
|---|
| Protein GI | 119387377 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3700] Acid phosphatase (class B) |
|---|
| TIGRFAM ID | [TIGR01672] HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAAC GACTGACCAT GATCGCGCTG CTGCTTGCCG CCTGGCCCGC GCTGGCAGAT
GACGCCTCGA ACCTCAATCC CGGGGTCACC ACCTCGGAGC TGCTGGCGAC CGCGCCGGTG
CATTGGGTCT CGGTCCCGCA GATCGCGGCC AGCCTTGAGG GACAGCCGCC GATGGCCGTG
GGCTTCGACG TGGACGATAC GGTGCTGTTC TCCACGCCCT GCTTCTATTA CGGCAAGAAC
AGGTATTCGC CCGGTTCCGA GGATTACCTC AAGATGGACG AGTTCTGGAC CGACATCCAC
ACCAACAACT GCGACCAGTA TTCGATGCCG AAAGAGGTTG CGCGCGAATT GCTGGACATG
CATGTGGCGC GCGGCGACGA CATCTATTTC ATCACCGGCC GGACCAAGGG CAGCGGCGAG
GAAACCCTGA CCGCGACGCT GCAAAAGACC TTCGACCTTG AAAAGATGCA TGACGTGGTC
TTTACCGCCT CGTCGGAAAA CAAGGTGCAG TTCCTGAAGG ATCACGGGCT GAAGATCTAT
TACGGCGACG CCGACAGCGA CATGCGTGCG GCGCTTGAGG CGGGGATCCG GCCTATCCGC
GTCATGCGGG CGCAAAACTC CAGCTACAAG CCCGACCCGC GCAACGGCAG TTTCGGCGAA
GAGGTCATCG TCAATTCGAC CCAGTAG
|
|---|
| Protein sequence | MSKRLTMIAL LLAAWPALAD DASNLNPGVT TSELLATAPV HWVSVPQIAA SLEGQPPMAV
GFDVDDTVLF STPCFYYGKN RYSPGSEDYL KMDEFWTDIH TNNCDQYSMP KEVARELLDM
HVARGDDIYF ITGRTKGSGE ETLTATLQKT FDLEKMHDVV FTASSENKVQ FLKDHGLKIY
YGDADSDMRA ALEAGIRPIR VMRAQNSSYK PDPRNGSFGE EVIVNSTQ
|
|---|
| |