Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4653 |
Symbol | |
ID | 4583156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 142879 |
End bp | 143721 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639771957 |
Product | RpiR family transcriptional regulator |
Protein accession | YP_918410 |
Protein GI | 119387376 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.562293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCCCT TTGACGGCGC CGTCCTGACT GCGCGAGGTG AGATGCTTGA CCGGATCCGT CAATCCCTGG CCAGCTTCAC CCCGGCCGAG CGCCGGGTGG CCGAGGCGGT GCTGGATACG CCCAGCACCG CGATCACCTG GTCGATCTCG GATGCGGCGC GCATCGCAAA GGTCAGCGAA CCCTCGATCA TCCGCTTCTG CAGGCGGCTG GACTGCGACG GTTTTCCCGA TTTCCGGCTG AAGCTGGCGC AGCAATTGGC CAAGCACCAG CCCGCGCCGC AACCTTTGGC GCGGCCGGGG TCGGGCAACG ACGATCCGCT GGCGGCAATG GTCGACGACA TCTTCCAGCG CGCCGGGCAG GCCATCGAGG AGGCACGGCG CGATCTGGAT CTGGGCGCCC TGCGCGCGGC GGTCGCCATG CTGGGCAAGG CGCGGCGCGT GGATATCTAT GGCTATGGCA GCTCGGGCTT CATGGCCAGC GAGGCGCAGC ACCGGCTGGC GGCCCTTGCC ATTCCCGCCG TGGCCTATTC CGACCCGACC TTGCAGATGC ACTCGGCGCC GCTGCTGGGG CCGGGCGACC TTTTGTTCGT GCTGTCCTTC TCGGGGCTGA CCAGCTACCT CATCTCGAAC ATCGAGATCG CGCGCAAGGC CGGAGCGCCG GTGCTGGCCA TCTCGCCCAA GGGATCCATC GTCGCCTCAC TTGCCGATGT GAACCTGAAC TTGAACGCCT ATCGGCAGTC CTCGGGCCGG ATGGCGGTCC CGACGGGCCG CGTGGCGCCG ATGTATGTCC TGCTTGACGC GCTGTTCGCC GCGATGGCCG AAGAAATGGG CGGGGAGCAT TGA
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Protein sequence | MAPFDGAVLT ARGEMLDRIR QSLASFTPAE RRVAEAVLDT PSTAITWSIS DAARIAKVSE PSIIRFCRRL DCDGFPDFRL KLAQQLAKHQ PAPQPLARPG SGNDDPLAAM VDDIFQRAGQ AIEEARRDLD LGALRAAVAM LGKARRVDIY GYGSSGFMAS EAQHRLAALA IPAVAYSDPT LQMHSAPLLG PGDLLFVLSF SGLTSYLISN IEIARKAGAP VLAISPKGSI VASLADVNLN LNAYRQSSGR MAVPTGRVAP MYVLLDALFA AMAEEMGGEH
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