Gene Pden_4648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4648 
Symbol 
ID4583151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp136951 
End bp137886 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content66% 
IMG OID639771952 
Producthypothetical protein 
Protein accessionYP_918405 
Protein GI119387371 
COG category[S] Function unknown 
COG ID[COG3246] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCA AGAAACCCCC CGTCGTCATC ACCTGCGCCA TCACCGGTGC GATCCACACG 
CCGACCATGT CGGATGCGTT GCCCTATACG CCCGAGGACA TCGCGGCGCA GGCCATCGCG
GCCTCCGAGG CGGGCGCCGC GATCCTGCAT CTGCACGCCC GCCGCCCCCA GGACGGCGGC
GTGACCATCG ACCCCGAGGC CTTCGCCGCC TTCCTGCCGC GCATCAGGCA ATCGACCGAT
GCGGTGGTCA ACATCTCGAC CGGCGGCAGC CTGACCAACA GCATCGACGA GCGCATCGCC
CCGGCGCTGC GCTTCTCGCC CGAGATGTGC TCGCTGAACA TGGGCAGCAT GAATTTCAGC
TTCCACCCGC TGGCCCGGCG CTACGACACC TGGAAATTCG ACTGGGAGCG CGACTACGTC
GCCAGGTCCG ACGGCAACAT CTTCCGCAAC ACCTTCGCGG ATATCGAGAA CGCGGCGAAC
CAGCTTGCCC CCCACGCCAT CAAGTTCGAG CATGAATGCT ACGATGTCGG CCATCTCTAC
AACCTGCGCT TCTGCATGGA TATCGGGCTC TTCAAGGCGC CGGTCTTCAT CCAGTTCATC
TTCGGCATCC TGGGCGGCAT CGGTCCCGAG GTGGACAACC TGGTCTTCAT GAAGCGCACC
GCCGACCGGC TGTTCGGCGA CGACTATCGC TGGTCGGTGC TGGGCGCGGG GGGCGCGCAG
ATGCCCCTGG CCACCACCGC CAGCCAGATG GGCGGCAACG TCCGGGTGGG GCTGGAGGAT
TCGCTGCTGA TCGCGCGCGG CAAGCTGGCG GAATCGAACG CCCAGCAGGT CGCCAAGATC
CGCCGCATCA TCGAAGATTT GGGCAGCGAG GTCGCGACCC CCGGCCAGGC GCGCGAGATC
CTTGGCCTCA AGGGCGCCGA TCGGGTCGGC TTCTGA
 
Protein sequence
MPRKKPPVVI TCAITGAIHT PTMSDALPYT PEDIAAQAIA ASEAGAAILH LHARRPQDGG 
VTIDPEAFAA FLPRIRQSTD AVVNISTGGS LTNSIDERIA PALRFSPEMC SLNMGSMNFS
FHPLARRYDT WKFDWERDYV ARSDGNIFRN TFADIENAAN QLAPHAIKFE HECYDVGHLY
NLRFCMDIGL FKAPVFIQFI FGILGGIGPE VDNLVFMKRT ADRLFGDDYR WSVLGAGGAQ
MPLATTASQM GGNVRVGLED SLLIARGKLA ESNAQQVAKI RRIIEDLGSE VATPGQAREI
LGLKGADRVG F