| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4646 |
|---|
| Symbol | |
|---|
| ID | 4583149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | + |
|---|
| Start bp | 134870 |
|---|
| End bp | 135652 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639771950 |
|---|
| Product | cyclase family protein |
|---|
| Protein accession | YP_918403 |
|---|
| Protein GI | 119387369 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1878] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCAG GCCGCCGCAT AGTCGATCTG TCGGTTCCCA TCGAGAACAC GGCCCATGCC
GATCCGCCGG GGATGGGGCC CAGCATCGAA TATTTCGCCC ATGATGCCAC GGGGCAGGAC
ATCGTCGCCT TCTTTCCCGG CATGACGGTG GACCAGTTGC CGGGGTCGGA GGGCTGGGCG
CTGGAGAAGG TCCGGCTGAC CACCCATAAC GGCACCCATG TCGATGCGCC CTATCACTAT
CACTCCACCA TGGATGGCGG CGTTCCCGCG GCAAAGATCG ACGAATTGCC GCTGGACTGG
TTCTTTGGCC CCGGCGTCAA GCTGGACTTC CGGCACCTGC CAGACGGGCA TGTGGTCTCG
GGCGCCGAGA TCGAGGCCGA GCTGGCCCGC ATCGGCCATG AGCCTGCTCC GGGCGAAATC
GTGCTGGTGA ATACCTCGGC GGGGCTTGCC TATGGCCAGC CGGACTACGT GTCCCGCGGC
TGCGGCATGG GGCGCGAGGC GACGCTTTGG CTGACCGAGC GCGGCATCCG GGTGGTCGGC
ACCGATGGCT GGTCCTGGGA TGCGCCCTTC GTGCATACCA GGAAGCGGTG GGAGGGAACC
CGCGACCCCG GCATCATCTG GGAAGGCCAT CGCGCCGGGA TGGTGCGGGG CTATTGCCAG
ATCGAAAAGC TGCACAACCT GGAAGGCTTG CCGCCCTTTG GCTTCATGGT GTCGTGCTTT
CCCGTGAAGA TCCGCGCGGC TTCCGCCGGA TGGACCCGTG CCGTCGCCAT CTTTGACGAA
TGA
|
|---|
| Protein sequence | MAAGRRIVDL SVPIENTAHA DPPGMGPSIE YFAHDATGQD IVAFFPGMTV DQLPGSEGWA
LEKVRLTTHN GTHVDAPYHY HSTMDGGVPA AKIDELPLDW FFGPGVKLDF RHLPDGHVVS
GAEIEAELAR IGHEPAPGEI VLVNTSAGLA YGQPDYVSRG CGMGREATLW LTERGIRVVG
TDGWSWDAPF VHTRKRWEGT RDPGIIWEGH RAGMVRGYCQ IEKLHNLEGL PPFGFMVSCF
PVKIRAASAG WTRAVAIFDE
|
|---|
| |