Gene Pden_4641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4641 
Symbol 
ID4583144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp128042 
End bp129550 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content64% 
IMG OID639771945 
Producthypothetical protein 
Protein accessionYP_918398 
Protein GI119387364 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.178659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACAG GTCAGATCCT CATCGCACTG GTCGCAGGCG TCATGCTTGC CTTTGCCGCA 
TCCGGCGGCA AGGCCCAGAC CGCCTGCAGC GCCATGCTCA TCACCGATCC GACCTCGGCC
GATTTCCTGA CCGGAGACAC GCCCTTCGGC CATACCCAGG ACGGAATGAA CTGCTATGGA
TGGCAGATGT TCCTGTCGCT GAACTGGCCG GCCGATCCCG GATGGCCGCA AACGCCCGCC
ATGGCCGGCG AGCCGGATCG CAGCGCGACA ATCGCCGATT TCGGCCTGCC CGGCCCGGCG
GGACAGCCGA TGCAGCGACC CACGGTCTGG CAAAGCTTCA TGCCGGCGCC CGAGATATTC
AAGCCCTTTG CGGCCATGCC GACCGGCTGG GGAGAAACCT CGCCGCCGCC CGCCAGTTGC
GGCTCCGCCT CGCTGGCAGC CTCGGCCGGG TCGATCCGCA TGCTGAACGC GGTCTCCAAA
TCCGCCGTGA GCCCGCGTCA CGGCTTCAAC CTCGACACCG GAACGATGTC ATCCATATCG
GACGAAATCG AAGAGGCTAC GGGTGGCTGG CTGACCGATC AGAAGGGCAA GCTGGTGTTT
TTCGAACGGA TGATCGGCAA GGCCGAATAC GACTATATCG TCGCGAAGGG CCTGTATGAC
GCGGCCAACC AGTTGAAAGT GGCGACCAAT GCCGACGGAG CCACCCCCGA AGGCCTGTCC
CTGCCCAAAG GCACGCCACC GGGATCGGCC GTTCAGAACC AGGATGAGCT TGGCGCCTTC
GAGCTGAAGG CCGCCTGGCG GAACCTGACC GGGCTGGATG ACCTTTATGG CCGCTATCTG
ACCTCCACGG TCTATCTGCT GTATCCCGAC GGCTCTTGCG AAAAGGCTGT CGTCGGGCTG
GTCGGTCTCC ATATCATTCA CAAGACCGCC TCCATGCCAG ATTTCGTCTG GTCCACCTTC
GAGCAGATCG ACAATGTTCC GGGCGCGTCC GCGCCGGAAG TGGATTTCAG TTTCAACAAC
CCGGCCTCGA ATGCGAAGCC GAACCAGATG CCGCACTGTG TGAATGGTGT CTGCGACTAT
TCCCTCCCCA TCCAGGTCAC GCGCGAAGTC GCGATCCCGG CCGGTGTGGC GCAGACCAAC
CGCGACGTGC AGCAGTTGCT TGCGGACCGG ACGGGGGGCA AGTCGGTGTT CCAGTACTAC
CAGCTCGTGA ACGTGCTGTG GGACGGCGCA CCGACCCCGC CGTCACCGGA ACCCGGCGCG
AATGCCCAGG TTCCGCTGGT CTATGGCACC TTCCAGACGG ATGGCAGCGT GCCGGTCGCC
AATACGACGA TGGAGACCTA TGCGCAGCAA TTCACCCCCG GTCTGGGGCC GTCCTGCACC
GCCTGCCACA AGGGCGCCAC CATCGCCAAC AGCGCAACGC TGGCGTCGGA TTTTTCCTTC
CTGTTCTCGA CCGCGTCCAG CGCCACGAAA CTGCCGGGCC TGTTCATATC CCGCGACTTT
GTTCCATGA
 
Protein sequence
MRTGQILIAL VAGVMLAFAA SGGKAQTACS AMLITDPTSA DFLTGDTPFG HTQDGMNCYG 
WQMFLSLNWP ADPGWPQTPA MAGEPDRSAT IADFGLPGPA GQPMQRPTVW QSFMPAPEIF
KPFAAMPTGW GETSPPPASC GSASLAASAG SIRMLNAVSK SAVSPRHGFN LDTGTMSSIS
DEIEEATGGW LTDQKGKLVF FERMIGKAEY DYIVAKGLYD AANQLKVATN ADGATPEGLS
LPKGTPPGSA VQNQDELGAF ELKAAWRNLT GLDDLYGRYL TSTVYLLYPD GSCEKAVVGL
VGLHIIHKTA SMPDFVWSTF EQIDNVPGAS APEVDFSFNN PASNAKPNQM PHCVNGVCDY
SLPIQVTREV AIPAGVAQTN RDVQQLLADR TGGKSVFQYY QLVNVLWDGA PTPPSPEPGA
NAQVPLVYGT FQTDGSVPVA NTTMETYAQQ FTPGLGPSCT ACHKGATIAN SATLASDFSF
LFSTASSATK LPGLFISRDF VP