Gene Pden_4632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4632 
Symbol 
ID4583137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp118543 
End bp119655 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content65% 
IMG OID639771938 
Productbeta-lactamase 
Protein accessionYP_918391 
Protein GI119387357 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0925307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTC ACGGCGCTGT CGAGCGTTTG CAACTCATGC TCGACGACCA TGTCGAGAAT 
TTCGGCGCAA TCGGCGTGAT TGTCGGGATC GACCTGCCCG ACGCCGGGCG CATCTGCCTT
ACCGCCGGAT CGCGCGCGCA GGGCGAGGCG GCGCTTGGGG CATCGGATCT GTTCCAGATC
GGCAGCCAGA CCAAGACCTT TGTCGCCTTG TCGATCCTTC TTCTGTGCCG CGACGGCCTG
CTGGATCTCG ACGACCCGGT CGTCCGCCAC ATCGACCTGC CGATCGACGG GCGGATCACG
CTTCGCCACC TGATCATGAA CACATCGGGG TTGCCCGAAT ATCTTTCGCT CATCGATCCG
ACCTCGGCCG GTCGGATGGC TCCGCGGGAC ATGGTGATCC CGGCGCTCGA GCAAGGCGTG
CTGTTCGCTC CGGGGCAGCA ATTCGACTAT TCCAACACGG GCTGGGTGAT CGCCGCCATG
GTGATGGATG CGACGGCCCC GGGAGGCTAT GCCGGTTACG TGAAAGAGCG GATTTTCGGC
CCGCTCGGCA TGCAGGATTC CTGGGTCGGC AGCGGCTACC CGGAGGAACG GCTTGCGCAG
GGCTATCTGA AGCGCGCCGG ACGGCCGGCA ATCAGTGCCG CCAGGGGTTT TTCCCTGGCC
TGGGCCTATG GCGCCGGGGA CATCATCTCG AATTGCGCCG ACATGCTGGA CTTCTATCGG
GCCTTGGCAC GGCCCGACAA TCCGCTGGGC GTGACGATGC AGGACATGAC CGCGCATTGG
GCGCTGCCCG CCGAGAAGCC TTTCCACCCG CTCAGCCTTG GCGCGGCTTA CGGCTTTGGG
CTGGAAAGGC GGCGCTGGGG CGGGCTGGAG GTCTGGGGCC ATCCCGGCCG GACGGTGGGA
TACGGCGCAT CGTCGTGGTT CGTGCCCTCG ACCGGAGCGA TCGTGACGAC GGCCTTCATG
TATGTGGAGG ACGAATCCGA GCCGCCCCAT ATCGCCGCGC AGCGATACAA CCCCTCGATG
CTGTTCACGC AGGTATTGTG CACCGCCCAT GCCCTTGCCG ATCTTCTGCC CGCGGCGGTC
CCGGCACCCG TCCCGGTCGC CGGCAACCGA TAA
 
Protein sequence
MTSHGAVERL QLMLDDHVEN FGAIGVIVGI DLPDAGRICL TAGSRAQGEA ALGASDLFQI 
GSQTKTFVAL SILLLCRDGL LDLDDPVVRH IDLPIDGRIT LRHLIMNTSG LPEYLSLIDP
TSAGRMAPRD MVIPALEQGV LFAPGQQFDY SNTGWVIAAM VMDATAPGGY AGYVKERIFG
PLGMQDSWVG SGYPEERLAQ GYLKRAGRPA ISAARGFSLA WAYGAGDIIS NCADMLDFYR
ALARPDNPLG VTMQDMTAHW ALPAEKPFHP LSLGAAYGFG LERRRWGGLE VWGHPGRTVG
YGASSWFVPS TGAIVTTAFM YVEDESEPPH IAAQRYNPSM LFTQVLCTAH ALADLLPAAV
PAPVPVAGNR