Gene Pden_4625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4625 
Symbol 
ID4583130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp110273 
End bp111340 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content66% 
IMG OID639771931 
ProductGlu/Leu/Phe/Val dehydrogenase, dimerisation region 
Protein accessionYP_918384 
Protein GI119387350 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.466466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTTG TGATCACGGA TGAAACGCCG CCGGCGGGCT ATGAACGGCT TGTCCATGTC 
GAAGATGTCG AAAGCGGCCT TGACGCTTTT ATCTGCATCC ACTCCACCGC TTGCGGTCCC
GCGGCGGGAG GATGCCGGAT GTGGAACTAT GCCTCGCTTG ACGATGCACG CCGCGATGTG
CTGCGGCTGG CGGAGGGGAT GACCTGCAAG AACGCCATCG CCGATCTGGG CCTTGGTGGC
GGAAAGTCGG TGATCATCGG CAATTCGCGC ACCGACAAGT CGGAGGCGCT GTTCCGCGCC
TTCGGCCGCG CGGTCGACAG TCTGGGCGGG CTTTACTACA CCGCCGAGGA CGTCGGGATC
ACGCCCGACG ACATGGCCAT CGTGGCAAGC GAAACCCCCT ATGCGGTCGG GCTGAACAGC
GGCGCCCATG CCAGCGGCGA TCCGTCGCCC TTCACCGCCG AGGGCGTGTT TCAATGCCTC
CGGGTCGGGG CCGAGCAGGT CTTCGGCAGT GCCGATCTGA CCGGAAAGCG GGTGTTGGTG
CAGGGGCTGG GCCATGTCGG CATGGCGCTG GCCGAAAAGC TGCATGCGGC AGGGGCCGTG
CTTATCGTGT CCGATCTGAA CCAGAATGCG GTAAAGCGTG CGCAGACCGA TCTGGGCGCA
GAGATCTGCA GCCCGGAAGA GGTGTTTTCC CAGCAGATGG ATATTTTCGC GCCCTGCGCC
CTGGGCGGTA TCCTGACCGC CGAGACGGTC GCGCGGCTGA CCGCGAAGGT CGTCTGCGGG
GCGGCGAACA ACCAGCTTGC CACCCCGGAC ATCGCCGGGC ATCTGCGTGC CCGCGGCATC
AGCTATCTGC CCGACTACGT CGTCAACGGC GGCGGCATCA TCAGCGTCGC GGGCGAGATA
CACCGCCGCG GCGAAAACTA TCGCCGCGAA CGGCTTGCAG GCATCGCCGA GCGTATCCGC
CGCATCCTGG CGCTGAGCCA AAGCAGCGGC AAGACCACCA CCGAGGTCGC GAGCGACATG
GTCGCGGATA TTTTGGCGCA GGCGTCCTCC CGCCGGGTCC TGGCCTGA
 
Protein sequence
MALVITDETP PAGYERLVHV EDVESGLDAF ICIHSTACGP AAGGCRMWNY ASLDDARRDV 
LRLAEGMTCK NAIADLGLGG GKSVIIGNSR TDKSEALFRA FGRAVDSLGG LYYTAEDVGI
TPDDMAIVAS ETPYAVGLNS GAHASGDPSP FTAEGVFQCL RVGAEQVFGS ADLTGKRVLV
QGLGHVGMAL AEKLHAAGAV LIVSDLNQNA VKRAQTDLGA EICSPEEVFS QQMDIFAPCA
LGGILTAETV ARLTAKVVCG AANNQLATPD IAGHLRARGI SYLPDYVVNG GGIISVAGEI
HRRGENYRRE RLAGIAERIR RILALSQSSG KTTTEVASDM VADILAQASS RRVLA