Gene Pden_4616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4616 
Symbol 
ID4583121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp101404 
End bp102804 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content63% 
IMG OID639771922 
Productphenylhydantoinase 
Protein accessionYP_918375 
Protein GI119387341 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0044] Dihydroorotase and related cyclic amidohydrolases 
TIGRFAM ID[TIGR02033] D-hydantoinase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCT TCGACACGAT CATCACGGGC GGCCGCATTT CCACCGCTTC GGATACCTTC 
CAATGCGATA TCGGCATTCG CGAGGGGCGT ATCGCCGCGC TTGGCCACGA CCTTGGCATC
GCGGACGAAA CGATCGACGC GACCGGAAAA TGGGTTCTGC CCGGCGGCAT CGACAGCCAC
GTCCATATCT CGCAGCCCTC CGGCGAGGGG GTCGTGATGG CCGACGATTT CGAAAGCGCC
ACCCGTTCCG CCGCGCTTGG CGGCAATACG ATGGTGCTGC CCTTCTGCCT TCAGGAAAGC
GGCGTGCCCC TGCGCGAAAG CCTGAAAGAC TATCACGCCA AGGCCGAGGG TAGCTGCCAT
ACGGACGTGT CCTTTCATCT CATCATCTCG GATCCGACCG AACAGGTTCT GGGGCAGGAC
CTGCCCGCGC TGGTGCATGA GGGCTATACC TCGTTCAAGG TCTTCATGAC CTATGAAGGG
CTGGCACTGA GCGATCTGGA ACTGCTGAAG GTGATGGCCG TCGCGCGCGA GACACGCGCC
CTCGTCATGG TTCATGCCGA GAATTACGAC GTCATCCGCT ATCTGACCGA CCAGCTTGAG
CAGGCGGGCA GGACCGCGCC TTTTTTCCAT GCCACGTCGC GCCCCGTGAT CGCCGAGCGC
GAGGCGACCT ATCGTGCGAT CTCGCTGGCC GAACTGTCCG AAGTGCCGCT GATGGTCGTT
CATGTCTCGA ATCGCGAGGC GATGGAGGAA ATCCGCCGTG CCCGGCAGAA GGGCCTCAGG
ATCTTCGGCG AGACCTGTCC GCAGTATCTG ACGCTAACCG AAGGTGACCT GGAAGGGCTG
AACATGGAGG GGGCGAAATA CGTCTGCTCA CCCCCGCCGC GCGATCACGA GAGTCAGCAA
GCCTGCTGGG AGGGGCTCCA ACAGGGCGTT TTCGACGTGT TTTCCTCGGA CCATTGCCCG
TTCCGCTACG ACGATCCGCA GGGCAAGCTG ACTCCCAAGG GTCGCACCAG CTTCCGTTGG
GTGCCGAACG GGATTCCGGG CGTCGGGGCA AGGCTGCCGA TCCTGTTCTC GGAAGGGGTC
GTGAAGGGGC GCATCGATAT CAATCGCTTC GTTGCCCTTA CCGCGACCAA CCATGCCCGG
ACCTATGGCC TTTACCCGAA AAAGGGCACC ATCGCGGTCG GCGCGGATGC CGACATCGCC
ATCTGGGACC CCGGGGCGAA GAACCGGCTG ACCCATGCGA TGCTGAACGA TGGGGCGGAT
TATACACCCT ATGAGGGAAT GGAACTGACT GGCTGGCCGG TGCTGACCAT GTTGCGCGGA
CAGACCATCA TGCGGGACGG CGTGCTGACC GGGATCCGCG CAGGCGCGCA TGTCGCGCGA
CGCATCAGCG ACCACGCCTG A
 
Protein sequence
MTRFDTIITG GRISTASDTF QCDIGIREGR IAALGHDLGI ADETIDATGK WVLPGGIDSH 
VHISQPSGEG VVMADDFESA TRSAALGGNT MVLPFCLQES GVPLRESLKD YHAKAEGSCH
TDVSFHLIIS DPTEQVLGQD LPALVHEGYT SFKVFMTYEG LALSDLELLK VMAVARETRA
LVMVHAENYD VIRYLTDQLE QAGRTAPFFH ATSRPVIAER EATYRAISLA ELSEVPLMVV
HVSNREAMEE IRRARQKGLR IFGETCPQYL TLTEGDLEGL NMEGAKYVCS PPPRDHESQQ
ACWEGLQQGV FDVFSSDHCP FRYDDPQGKL TPKGRTSFRW VPNGIPGVGA RLPILFSEGV
VKGRIDINRF VALTATNHAR TYGLYPKKGT IAVGADADIA IWDPGAKNRL THAMLNDGAD
YTPYEGMELT GWPVLTMLRG QTIMRDGVLT GIRAGAHVAR RISDHA