Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4604 |
Symbol | |
ID | 4583109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | + |
Start bp | 88135 |
End bp | 88890 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639771910 |
Product | regulatory proteins, IclR |
Protein accession | YP_918363 |
Protein GI | 119387329 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAAGG CATTCATCAA GGGGTTGCGG CTGATCGAGG CGCTTGCGCT CAGCGATCAG CCGCGGGGCG TGACCGACCT GGCCAATGCG CTGGGGCTGA CGAAAAGCAA TGTCCACCGC CTGCTCGCGA CGCTGATCGC GCAGGGCTAT GTCCGGCAGG TGCCGCCGCA AAGCCATTAC GAGCTGACCA CGCGGATCTG GGAACTGGGC AGCCATGTCA TCCGCCGCAT GGACCTGACC CGCATCGCCC GCCCCGCCAT GGCCCGGCTG GCCGAGCAGA CCGGAGAGAC GGTGCATCTG TCGGTTCTGG ACGGCAGCGA GGTGGTCTAT CTCGACAAGA TCGAAAGCGC CCACCACATC CGCGCCCATA CCAGCGTCGG CGCCCGCGCC CCCGCCTATA CCGTCGCCAC CGGCAAGGCG ATGCTGGCGC AGATGCCCGA CAGCTATCTC GACCGCTTCG AGGGCCGGAT GCAGCGCTAT ACCGACACCA CCCGCATCAC GCTTGCCGAA CTGCGCGAGG ATATCCGCAT CGCGCGCGAG CAGGGTCATG CCCTTGTCCC CGAGGGTGAA TGGCGCGAGG GCATCGCCGC CTGCGCCTGC GCGATCCTGA ACCGCTCGGG CGAGCTTGCC GGTGCCATCG GCATGTCCGG CCCGGATTCG CGCATCAAGC GCAAGCAACT GCGCGAGATC GCGCCGCTTG TGATGGAGGC CGCCCGCGCC ATTTCCCTGG CCCTGGGCTA TGCCCCGCGC GTCTGA
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Protein sequence | MDKAFIKGLR LIEALALSDQ PRGVTDLANA LGLTKSNVHR LLATLIAQGY VRQVPPQSHY ELTTRIWELG SHVIRRMDLT RIARPAMARL AEQTGETVHL SVLDGSEVVY LDKIESAHHI RAHTSVGARA PAYTVATGKA MLAQMPDSYL DRFEGRMQRY TDTTRITLAE LREDIRIARE QGHALVPEGE WREGIAACAC AILNRSGELA GAIGMSGPDS RIKRKQLREI APLVMEAARA ISLALGYAPR V
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