Gene Pden_4604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4604 
Symbol 
ID4583109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp88135 
End bp88890 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content68% 
IMG OID639771910 
Productregulatory proteins, IclR 
Protein accessionYP_918363 
Protein GI119387329 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGG CATTCATCAA GGGGTTGCGG CTGATCGAGG CGCTTGCGCT CAGCGATCAG 
CCGCGGGGCG TGACCGACCT GGCCAATGCG CTGGGGCTGA CGAAAAGCAA TGTCCACCGC
CTGCTCGCGA CGCTGATCGC GCAGGGCTAT GTCCGGCAGG TGCCGCCGCA AAGCCATTAC
GAGCTGACCA CGCGGATCTG GGAACTGGGC AGCCATGTCA TCCGCCGCAT GGACCTGACC
CGCATCGCCC GCCCCGCCAT GGCCCGGCTG GCCGAGCAGA CCGGAGAGAC GGTGCATCTG
TCGGTTCTGG ACGGCAGCGA GGTGGTCTAT CTCGACAAGA TCGAAAGCGC CCACCACATC
CGCGCCCATA CCAGCGTCGG CGCCCGCGCC CCCGCCTATA CCGTCGCCAC CGGCAAGGCG
ATGCTGGCGC AGATGCCCGA CAGCTATCTC GACCGCTTCG AGGGCCGGAT GCAGCGCTAT
ACCGACACCA CCCGCATCAC GCTTGCCGAA CTGCGCGAGG ATATCCGCAT CGCGCGCGAG
CAGGGTCATG CCCTTGTCCC CGAGGGTGAA TGGCGCGAGG GCATCGCCGC CTGCGCCTGC
GCGATCCTGA ACCGCTCGGG CGAGCTTGCC GGTGCCATCG GCATGTCCGG CCCGGATTCG
CGCATCAAGC GCAAGCAACT GCGCGAGATC GCGCCGCTTG TGATGGAGGC CGCCCGCGCC
ATTTCCCTGG CCCTGGGCTA TGCCCCGCGC GTCTGA
 
Protein sequence
MDKAFIKGLR LIEALALSDQ PRGVTDLANA LGLTKSNVHR LLATLIAQGY VRQVPPQSHY 
ELTTRIWELG SHVIRRMDLT RIARPAMARL AEQTGETVHL SVLDGSEVVY LDKIESAHHI
RAHTSVGARA PAYTVATGKA MLAQMPDSYL DRFEGRMQRY TDTTRITLAE LREDIRIARE
QGHALVPEGE WREGIAACAC AILNRSGELA GAIGMSGPDS RIKRKQLREI APLVMEAARA
ISLALGYAPR V