| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4599 |
|---|
| Symbol | |
|---|
| ID | 4583338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | - |
|---|
| Start bp | 82229 |
|---|
| End bp | 82996 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639771905 |
|---|
| Product | putative CoA transferase, subunit B |
|---|
| Protein accession | YP_918358 |
|---|
| Protein GI | 119387324 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG CCCTGCCCCG CGAGATCCTG ATCTGCACCA TCGCCCGGCT GCTCGACGGC
GTGCGCCATG TCGCGGTCGG CGCCTCCTCC CCCATGCCTG CCGCCGGCGC GATGCTGCGC
CGGGCGCTGG ACGACGGACA GCGTCCGGTG CGGCTGTCGA TCCTTGGCTC GGTCGAGCAC
AATTTCTTCA CCAACGGCTC GGCGGAACTG TTCGACAGCG CGGGCCAGGG CCGGCTGGAT
GCCTTTTTCC TGGGCGGCGG CCAGATCGAC GGCCAGGCCA ATGTGAACCT GGTCGGCGTC
GGCGACTATC CGCAGGTCAA GGTGCGCTGG CCCGGCTCGT TCGGCTCGGC CTATCTGTAT
TTCACCGTGC CGCGCGTGAT TCTGTTCCGC GAAGAGCATT CGCCGCGCGT ATTGGTGGAC
AAGGTCGATT TCATCAGCGC CCCCGGCACC AGCGCCCCCG GCGTCTATCG CACCGGCGGG
CCGGTCGCGC TGCTGACCGG CAAGGCGCTG TTCCGCTTCG ACAAGGCGCG GCCGGGCTTC
ACGCTGGAGA GCGTCCATCC CGGCCATGAC CTGGACGAGA TCCGCGCGGC GACCGGCTTT
GCCTTCGACC ATGCGGAAAC GCCCGCCGCC ACCCCTGCCC CCGACACCGC CACCCTGTCG
CTGCTGCGCG GCCGGGTGCT GGATGAGCTT GCCGAAACCT ACCCCGCCTT CGCCGCCGAA
TGGCGCAGCG ACCTGGCGGC CCTGACCCGC GAAGGAAGCC CCGCATGA
|
|---|
| Protein sequence | MSAALPREIL ICTIARLLDG VRHVAVGASS PMPAAGAMLR RALDDGQRPV RLSILGSVEH
NFFTNGSAEL FDSAGQGRLD AFFLGGGQID GQANVNLVGV GDYPQVKVRW PGSFGSAYLY
FTVPRVILFR EEHSPRVLVD KVDFISAPGT SAPGVYRTGG PVALLTGKAL FRFDKARPGF
TLESVHPGHD LDEIRAATGF AFDHAETPAA TPAPDTATLS LLRGRVLDEL AETYPAFAAE
WRSDLAALTR EGSPA
|
|---|
| |