| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4597 |
|---|
| Symbol | |
|---|
| ID | 4583336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008688 |
|---|
| Strand | - |
|---|
| Start bp | 79990 |
|---|
| End bp | 81036 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639771903 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
|---|
| Protein accession | YP_918356 |
|---|
| Protein GI | 119387322 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGACA GCCTGACCAT CGGCATCATC GGCGACGGCT TCATGCAGCC GGGCTTCTTT
GAAACCGCAC TGCGCGAGAA ACTGCCCGGC CGCGAGCTGA CCATCCGCAG CATGGAGATC
GACTGGCCGC TGCGGCTGAA ATCCACCAAA TACGACCCCA CCCTGCCGGT GGGCGAGTTC
GTCGGCCGGC CCGAGGACTA TTTCGACTTC CTCGCCGATC TCGACATCCT CATCACTCAC
CTGGCGCCGA TCACCGCAGC AAGCCTCGAC CACGCCCCGC GGCTCAAGGC CATCGCCGTG
TCGCGCGGCG GGCCGGTGAA TATCGAAATG GCGGCGGCCC GCGCGCGCGG CATCCCGGTG
GTGAACACGC CCGGCCGCAA TGCCTCGGCG GTGGCGGAAT TCACCGTCGG CTCGCTGCTG
GCGGAAACCC GCAACCTGAT CCGCGGCCAC ATGGCCGTCG CCAGCGGCCG GTTCGGGCGC
GAATTCTATC ACTACGCCAA TACCGGCCCC GAACTGTGCG AGCTGACCGT CGGCATCGTC
GGCTATGGCG ACATCGGCAC ACGGGTCGCG CGGCTGCTGC AACCCTTTGG CTGCGGCATC
CTGATCTACG ACCCGTTCAA GGAGCTGACG CCCGAGGAAA CGGCCGCCGG CTTCGAAAAG
GCCGAGTTGG ACGACCTGAT GGCCCGCGCC GACGTGGTGA CGCTGCACCC CCGCGTCACG
CCCCAGACCA GGGGCATGAT CTCTCGCGCA CGGATCGCGA TGATGAAGCC CGGCGGCTAT
ATCGTGAACA CCACGCGCGG GCAGGTGCTG GACTATGACG CGCTTTACGA CGCGCTGGTT
TCGGGACAGT TGCGCGGCGC CGCGCTGGAT ACGTTCGAGC CCGAGCCGCC GCCCGCCGAC
TGGCCGCTGC TGAGGCTGCC CAACGTCACG CTTTCGCCGC ATATCGCCGG CGCCTCGCGC
TATTCCGCGA TCAAGGCCGC CGCCATGATC GCCGGCGACA TCGCGCTGAT CCTTGACGGC
AAGCCGCCGC TCTATCCCTG CAAGTGA
|
|---|
| Protein sequence | MTDSLTIGII GDGFMQPGFF ETALREKLPG RELTIRSMEI DWPLRLKSTK YDPTLPVGEF
VGRPEDYFDF LADLDILITH LAPITAASLD HAPRLKAIAV SRGGPVNIEM AAARARGIPV
VNTPGRNASA VAEFTVGSLL AETRNLIRGH MAVASGRFGR EFYHYANTGP ELCELTVGIV
GYGDIGTRVA RLLQPFGCGI LIYDPFKELT PEETAAGFEK AELDDLMARA DVVTLHPRVT
PQTRGMISRA RIAMMKPGGY IVNTTRGQVL DYDALYDALV SGQLRGAALD TFEPEPPPAD
WPLLRLPNVT LSPHIAGASR YSAIKAAAMI AGDIALILDG KPPLYPCK
|
|---|
| |