Gene Pden_4593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4593 
Symbol 
ID4583332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp73945 
End bp76260 
Gene Length2316 bp 
Protein Length771 aa 
Translation table11 
GC content69% 
IMG OID639771899 
Productmolybdopterin guanine dinucleotide-containing S/N-oxide reductases 
Protein accessionYP_918352 
Protein GI119387318 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID[TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0871534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCC GCATCCCGCA TTGCAGCCAT TGGGGCGCCT ATACGATCCT GGTCGAGGAC 
GGGCGGATCG CAGGCGTCGA ACCGCTGGCC CTGGACCCCG CGCCCTCGGC CATCATCCAT
TCCGTCGCCG AATGGGCGAA ACCCGACCGC CGCGTGCTGC GCCCCATGGT GCGCGAAGGC
TGGCTGGCCA AACGCGAGGG CAGCGACCGC CATGGCCGGG GCCGCGAGCG TTTCCTGGCC
GTTCCCTGGG ACGAGGCGCT GGATCTGGTC GCCGGCGAGA TCGCGCGCGT CGCAGGCAGC
TTCGGCAATG CCGCGATCTT TGCCGGCAGC TACGGCTGGA CCTCTTGCGG GCGGTTCCAT
CATGCCTCTT CGCTGCTGAA ACGGATGCTG AACCTGGCAG GCGGCTATAC CGGCCATGTC
GATACCTATT CCATCGCCGC CGGGCCGGTG ATCCTGCGCC ATGTGCTGGG CGACGACCGT
GCCTGCGGCG GGCAGGCCAA TACGCTGGAC GACATCGCCG AGAATACGGA AACGCTGGTG
GTCTTCGGCG CCATGTCGCC CCGCACCGCG CAAAGCGAGG CCGGCGGCAT CGGCGCACAT
TACCTGGAAG GCTATCTGCG CCGGATCGCG GAACGCGGGG TGCGGGTGAT CCATGTCTCG
CCGCTGCGCG ACGACCTGCC GGATTGGGTG GGCGCCGAAT GGTGGCCGAT CCGGCCCAAT
ACAGACGCGG CGCTGATGCT GGGCCTGGCA GGCGAAATCG TGATGGCCGG GCGGCACGAT
GCCGATTTCC TTGCCCGCTG CACCAGCGGC TCGGACGAGT TCCTGGCCTA TCTGCGCGGC
AAGCCGGACG GACAGCGCAA GGACGCCGCC TGGGCCGCGG CCATCACCGG CCTGCCCGCC
AATGCGATCC GGGCCTTGGC GCTGCGGCTG GTGGACAGCC GCAGCATGCT GACCGTCAGC
TGGGCCCTGC AACGCGCCCA TCATGGCGAG CAGCCCTTCT GGGCGGCGCT TGGGCTGGCA
GCCGTGGCGG GCCAGATCGG CCTGCCGGGC GGCGGGGTCG GCTACGGCTA CGGCTCACTC
GGCGGCGTGG GTGCGCCCTT TTCCGTCGGC AAGTCGCCGG GCATGTCGCA GGGGGTCAAG
CCCATCGACA GCTTCATCCC GGTGGCACGG ATCAGCGACA TGCTGCTGAA CCCCGGCGCG
CCCTTCACCT ATCAGGGCGA GACGCGGCAC TATCCCGACA CCCGGCTAGT CTATTGGGCG
GGCGGCAATC CCTTCCACCA CCATCAGGAC CTGAACCGGC TGTCCGAGGC ATGGACCCGG
CCAGAAACGA TCGTCGTCCA GGATCCGATG TGGACCGCGA CCGCGCGCCG GGCGGATATC
GTGCTGCCGG CCTCGACCTC GATCGAGCGC AACGACCTGG CCGGCAACAA GCGCTGCGAC
CTGATCCTGG CCATGCGGCA GGCCATCGCG CCGCTGGGCC AGTCGCGCTC GGATTTCGAC
ATCTTCGACG CATTGGCCCA GCGGCTGGGC GTCGGCCCCG AGTTCAACGA GGGCCGGGAC
GAGATGGGCT GGATCCGGCA TCTCTACGAT GAAAGCCGCA CCCATGCCCT GCGCGCGCAT
GGCTTCCTGA TGCCGGATTT CGAGACCTTC TGGGAACGCG GCCATGCCCC GGTTCCGGTG
CAGCGCAACC ATGTCTATCT GGCCGGCTTT CGCCATGACC CGGCGGGCAA TGCGCTGGAC
ACGGAAAGCG GGCGGATCGT GCTGGGCAGC AAGACGCTGG CGCGGCTGGA CCATGACGAC
TGCCCGGCGC ATCCGGCCTG GCTGCCGCCC GCCGAATGGT TGGGCGAGGC AAGGGGGGAC
GAGTTGCACC TGATCTCGCA CCAGCCGGCC GGGCGGCTGC ACAGCCAACT GGAGACCGGC
GCCGCCAGCA TGGCCGGCAA GCGCCACGGG CGCGAGCAAT TGCGGCTGAA CCCCGCCGAT
GCGCAGGCGC GCGGCATCGT GGATGGCGCC ACGGTGCGAC TGTGGAACGC GCGCGGCGCC
TGCCTTGCCA CGGCCTGCAT CAGCAGCGAC ACCGCGCCGG GCGTTGCGGT GTTGCCGACC
GGGGCCTGGT TCACGCCCGT CGGGGACGGC CCGGAAATCT CGGGCAACCC CAATGTGCTG
ACGCTCGACA TCGGCACCTC GGCCTTTGGG CAGGGCTGCT CCGCCCATAC CTGCCTGATC
CGCGTCGCCC CCCATGCCGG CGACAACCGC GACCCGATGC GGACCTATCA ATCGCAACTG
GCAGACATCC TGCCCGACCT GGAGGAGACC CCATGA
 
Protein sequence
MIRRIPHCSH WGAYTILVED GRIAGVEPLA LDPAPSAIIH SVAEWAKPDR RVLRPMVREG 
WLAKREGSDR HGRGRERFLA VPWDEALDLV AGEIARVAGS FGNAAIFAGS YGWTSCGRFH
HASSLLKRML NLAGGYTGHV DTYSIAAGPV ILRHVLGDDR ACGGQANTLD DIAENTETLV
VFGAMSPRTA QSEAGGIGAH YLEGYLRRIA ERGVRVIHVS PLRDDLPDWV GAEWWPIRPN
TDAALMLGLA GEIVMAGRHD ADFLARCTSG SDEFLAYLRG KPDGQRKDAA WAAAITGLPA
NAIRALALRL VDSRSMLTVS WALQRAHHGE QPFWAALGLA AVAGQIGLPG GGVGYGYGSL
GGVGAPFSVG KSPGMSQGVK PIDSFIPVAR ISDMLLNPGA PFTYQGETRH YPDTRLVYWA
GGNPFHHHQD LNRLSEAWTR PETIVVQDPM WTATARRADI VLPASTSIER NDLAGNKRCD
LILAMRQAIA PLGQSRSDFD IFDALAQRLG VGPEFNEGRD EMGWIRHLYD ESRTHALRAH
GFLMPDFETF WERGHAPVPV QRNHVYLAGF RHDPAGNALD TESGRIVLGS KTLARLDHDD
CPAHPAWLPP AEWLGEARGD ELHLISHQPA GRLHSQLETG AASMAGKRHG REQLRLNPAD
AQARGIVDGA TVRLWNARGA CLATACISSD TAPGVAVLPT GAWFTPVGDG PEISGNPNVL
TLDIGTSAFG QGCSAHTCLI RVAPHAGDNR DPMRTYQSQL ADILPDLEET P