Gene Pden_4592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4592 
Symbol 
ID4583331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp73370 
End bp73948 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content65% 
IMG OID639771898 
Productuncharacterized peroxidase-related enzyme 
Protein accessionYP_918351 
Protein GI119387317 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.991129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAA CCGCCGACAC CCCCGTCAGC CGCTTTGCCG TTCCCCGCCT TGCCGACATG 
CCCGAGGATA TCCGCACCCG CATCGAGGCG GTGCAGGAGA AATCCGGCTT CATCCCCAAT
GTGTTCCTGA CGCTGGCGCA TCGTCCGGAC GAATTCCGTG CCTTCTTCGC CTATCACGAC
GCGCTGATGG ACCGCCCCGG CAACCTGACC AAGGCCGAGC GCGAGATGAT CGTGGTGGCC
ACCTCGACCG TGAACCAGTG CCAGTATTGC GTCATCGCCC ACGGCGCGAT CCTGCGCATC
CGCGCCAAGA ACCCGCTGGT CGCCGACCAG GTGGCGATCA ACTATCGCAA GGCCGACATC
ACGCCCCGGC AAAAGGCGAT GCTGGATTTC GCCATGAAGG TCTCGGCCCG CGCGCAAGAG
GTCGGGGACG ACGACTTCGC CACCCTGCGC GGCCACGGCT TCGACGAGGA CGACATCTGG
GACATCGCCG CCATCGCCGC CTTCTTCGGC ATGTCGAACC GGCTGGCCAA CGTGTCCAGC
ATGCGGCCCA ACGACGAATT CTACACGATG GGCCGCTGA
 
Protein sequence
MTETADTPVS RFAVPRLADM PEDIRTRIEA VQEKSGFIPN VFLTLAHRPD EFRAFFAYHD 
ALMDRPGNLT KAEREMIVVA TSTVNQCQYC VIAHGAILRI RAKNPLVADQ VAINYRKADI
TPRQKAMLDF AMKVSARAQE VGDDDFATLR GHGFDEDDIW DIAAIAAFFG MSNRLANVSS
MRPNDEFYTM GR