Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_4581 |
Symbol | |
ID | 4583320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008688 |
Strand | - |
Start bp | 64195 |
End bp | 65091 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639771887 |
Product | LysR family transcriptional regulator |
Protein accession | YP_918340 |
Protein GI | 119387306 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.325536 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGGTC GTGTGGATAG CTGGGATCAT TGGCGCAGCT TTCTGGCCGT GGTCGAGGAG GGCAGCCTGT CGGGGGCGGC CAGAGCCCTG AGGCTGACCC AGCCGACGGT GGGCCGTCAT GTCGACGCGC TCGAGGACGG GATCGGGGCA AGGCTCTTCA CCCGTTCGCG GGGCGGCCTG GACCCGACGC CGCTGGCGCT GGCGCTGGTG TCGCAGGCAA GGGACATGGC CATGATCGCG GACGACCTGG TCCGCACGGC CTCGGGCGAG CGGGACGAGC TGCGCGGCAC CGTCCGGCTG GCGGCGGTCG ATATCGTCGG AACCTTCGTG CTGCCGCCGA TGCTGGCCGC CTTTCACGAG CGCCACCCCG GGATCGACAT CGAGCTGGCG CTGTCGACCC GCAACGAGAA CCTTCTGCGC CGCGAGGCCG ACATCGCGGT GCGCATGGTT CGCCCCGAAC AGCAGGCCAT CGTTGCGCGC CATGTGGGGT TCGTGCGGGT CGGCCTGTTC GCCCATCGCC GCTACGTCGC CGCCCACGGC TTGCCCGAGA CGGTCGAGGC GCTGTTCTCC CACCCGCTGA TCGGCATCGA TCAGGAAGAG GGCCTTGTCG CCGGCATATC CTTCGGCGGC CACCCGCTGT CGCGCGAGAG CTTCGCCTTT CGCTGCGACA GCGCCGTGGC ACAGCTGATG GCCGTGAGGG CCGGCTTCGG CATCGGCGCC TGCCACCTTG GACTTGCGGC CGATGAGCCG GAACTGGTGC GCGTGCTGCC GGATATGGTG GAGTTCGGCT ACGAGATGTG GATCGCCATG CACGAAGACC TGCGCGACAC GCGCCGGATG CGGTTGCTGT TCGACCATCT GGCCGAAAAC CTCGCCGCAT ATTCGGAGCG GCGATAG
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Protein sequence | MSGRVDSWDH WRSFLAVVEE GSLSGAARAL RLTQPTVGRH VDALEDGIGA RLFTRSRGGL DPTPLALALV SQARDMAMIA DDLVRTASGE RDELRGTVRL AAVDIVGTFV LPPMLAAFHE RHPGIDIELA LSTRNENLLR READIAVRMV RPEQQAIVAR HVGFVRVGLF AHRRYVAAHG LPETVEALFS HPLIGIDQEE GLVAGISFGG HPLSRESFAF RCDSAVAQLM AVRAGFGIGA CHLGLAADEP ELVRVLPDMV EFGYEMWIAM HEDLRDTRRM RLLFDHLAEN LAAYSERR
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