Gene Pden_4561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4561 
Symbol 
ID4583300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp44868 
End bp46031 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content72% 
IMG OID639771867 
Productglycerate kinase 
Protein accessionYP_918320 
Protein GI119387286 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1929] Glycerate kinase 
TIGRFAM ID[TIGR00045] glycerate kinase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.532738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTCA CCGTCCTGAT CGCGCCTTCG GGCTTCAAGG AATCGCTTTC AGTCAAGGAT 
GTGGCCGAGG CCATCGCGCG GGGCGTCCGC CGCGCCGCCC CCCATGCGAC CATCCTGACC
GCGCCGATGG TCGATGGCGG CGAGGGCACG ACCGAGGCGC TGGTCGCCGC GACCGGCGGA
CGGTTAATGC AGGCCGAGGT GACCGGCCCG ATGGGACAGC CCGTGGACAG TTTCTGGGGG
CTGATGGGCG GCGATGGGCC GCGCACCGCC GTGATCGAGA TGGCCGCCGC GGCCGGCCTG
TCGCTGGTGC CGCGCGACCG GCGCGACCCG ACCCTGACCA CCAGCCGCGG CGTGGGCGAA
CTGATCCTGA AGGCGCTGGA CCATGGCGTG GACCGCATCC TGATCGGCTG CGGCGACAGC
GGCATCAACG ATGGCGGTGC CGGCATGGCG CGCGCGCTTG GTGCCCGGCT GCTGGACGGC
GAGGGGCGCG AGTTGCCCGA GGGCGGCGGC GCGTTGCAGG ATCTGGCGCA GATCGACGTC
TCGGGGCTGG ACCCGAGGCT GGCCGGGGTG GGGATCGACG CGGCGGTGAA CTGGCACAAC
ATGCTGCTGG GACCGCGCGG CGTGGCCCGC GTCTTCGGCC CGCAAAAGGG CGCGAGCCCC
GAGCAGGTCG AGCAACTCGA CCGCGGCATG ACCCGCTATG CGCAGGCGAT CATGGCGGCC
ACGGGCCGGG ACGTGGCGCC GATGCCGGGC GCCGGGGCCT CGGGCGGGCT TGGCGCCGGG
CTGGTCGCCT TTGCCGGTGC GGTGCTGCAT CCGCGTTTCC AGATCATGCT GGATTACCTG
GATTTCGACC GCCTGCTGGG CCGCGCCGAC CTGGTCATCA CCGCCGAGGG TGCGCTGGAT
GCGCAAAGCC CCTTCGGCAA GGTTCCCTGC GAGGTCGCCC GCCGCGCCGA GGCGATCGGT
ATCCCGACCG TCGCGCTGGC GGGCACCATC GGCAAGGGCG CGCGCCAGAC CTATGAGCAC
GGGATCGGCG CCTATGCCTC GATCATGCGG CGGCCCTGCT CGCTGGAAAA GGCCATCGGC
GAGGGTGCGA AACTGCTGCG CAACGCCGCC GAGAACACGA TGCGGATGCT GCTGGTCGGC
CAGCGGCTTG CCGCCCGTGC CTGA
 
Protein sequence
MSLTVLIAPS GFKESLSVKD VAEAIARGVR RAAPHATILT APMVDGGEGT TEALVAATGG 
RLMQAEVTGP MGQPVDSFWG LMGGDGPRTA VIEMAAAAGL SLVPRDRRDP TLTTSRGVGE
LILKALDHGV DRILIGCGDS GINDGGAGMA RALGARLLDG EGRELPEGGG ALQDLAQIDV
SGLDPRLAGV GIDAAVNWHN MLLGPRGVAR VFGPQKGASP EQVEQLDRGM TRYAQAIMAA
TGRDVAPMPG AGASGGLGAG LVAFAGAVLH PRFQIMLDYL DFDRLLGRAD LVITAEGALD
AQSPFGKVPC EVARRAEAIG IPTVALAGTI GKGARQTYEH GIGAYASIMR RPCSLEKAIG
EGAKLLRNAA ENTMRMLLVG QRLAARA