Gene Pden_4557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4557 
Symbol 
ID4583296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp40436 
End bp41701 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content72% 
IMG OID639771863 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_918316 
Protein GI119387282 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGC CGATATTGTT GCTGTCCCTG GTCCTGGCCG TTCTGCTGGC CGACATGCGC 
CCGCAGGCGG CCGGCTGGTG GATATCCGCC GCATGGGCGG ATGACGACGA CGATGACGAC
GACGACGATG ATGACGACGA CGCGCCGGTC CGCCGACGCG CGCCCCGGGT CCAGCCCGCG
CCCCTGCCCA CCCGCGCCCC GAACGAGGTC ATCGCGCGCG GGCTGTCCGA AGCTGACCTG
ACCGTGCTGG AGGATACGGG CTTTCGCGTG CTGCGAGAGG TCACGCTGGC CGCCGACCGG
CCGCTGCACC GGCTGCGCAA GCCCGACGCG ATGACGATGG ACGCGGCGCG CGCGACGGTG
CGCCGGATGG GCTCGGCCGA GGCGGCGGAT TTCAACCATT TCTACCGCCC TGGCAACGCC
GCCGCATCCT CGTGTCGCGG TGCGGATTGC CCGGCGCGGC AGATGATCGC CTGGCCCCAG
GATACGACCG GATGCGGCGG GCCGGTGCGC ATCGGCATGG TCGATACCGG GCTGAACGCG
GATCATGCGG TGCTGAAGGA CGCGCGCATC CGGGTCCACC GGCTGGATCC GGGCGACGGG
CTGGACGCCT CGGACGCGCT GCACGGCACC GCCATCGCGG CGCTTCTGGT CGGGCGGGCG
GACAGCCGCA CGCCCGGCCT GGTGCCGGGG GCCGAACTCG TCGCCGTCGA TGCCTTCCAC
AAGCGGCGCG GGGACGAACG CGCCGACGCC TTCGCCCTGA TCGAGGCGCT GGATTATCTG
GCGGCGCAGG AGGTGGACAT CGTGAACCTG TCGCTGGCCG GCCCCCGGAA CACCGCCCTT
GGCCAGCAGA TCCGCCGCAT GGACCGGCAG GGCATCGTGC TTGTCGCGGC GGCGGGCAAT
GGCGGCCCGG CGGCCAAGCC GGCTTTCCCG GCCGCCTTCG CCCCCGTGAT CGCCGTGACT
GCCGTGGACC GCCGCGAACA GGTCTATCGC CGCGCAAACC GGGGCGAGCA TATCGACCTG
GCAGCCCCGG GGGTGAATGT CTGGACCGCG GCCTCGATCA GCGGCGCGCG GACCAAGACC
GGCACCTCCT ATGCGACGCC TTTCGTGACC GCCGCAGCGG CGTTGATCCT GCAAGCCCGG
CCCGGCCTGA CCCCGGCCGA GGTGCGGGCG CAATTGCAGG AAACCGCGCG CGACCTGGGC
AAGGCCGGCC CCGACGAGAT CTTCGGCCAC GGCCTTGTCC AACCCGTGGC CGAATGCCGG
AACTGA
 
Protein sequence
MRLPILLLSL VLAVLLADMR PQAAGWWISA AWADDDDDDD DDDDDDDAPV RRRAPRVQPA 
PLPTRAPNEV IARGLSEADL TVLEDTGFRV LREVTLAADR PLHRLRKPDA MTMDAARATV
RRMGSAEAAD FNHFYRPGNA AASSCRGADC PARQMIAWPQ DTTGCGGPVR IGMVDTGLNA
DHAVLKDARI RVHRLDPGDG LDASDALHGT AIAALLVGRA DSRTPGLVPG AELVAVDAFH
KRRGDERADA FALIEALDYL AAQEVDIVNL SLAGPRNTAL GQQIRRMDRQ GIVLVAAAGN
GGPAAKPAFP AAFAPVIAVT AVDRREQVYR RANRGEHIDL AAPGVNVWTA ASISGARTKT
GTSYATPFVT AAAALILQAR PGLTPAEVRA QLQETARDLG KAGPDEIFGH GLVQPVAECR
N