Gene Pden_4555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4555 
Symbol 
ID4583294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp37949 
End bp38320 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content68% 
IMG OID639771861 
Productresponse regulator receiver protein 
Protein accessionYP_918314 
Protein GI119387280 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATA TCCTTGTGGT CGAGGATGAG GACAATATTG CCACCGCCCT GGATTTCCTG 
CTGTCGCGCG ACGGCCACAA GCACCGCCGC ATGGCCACGG GCGCCGGCGC GCTCGAGGAA
ATCCGCGCCA GTCATCCCGA TCTGGTGCTG CTGGACGTGA TGCTGCCCGA CGTCTCGGGC
TACCAGATCG TGCAGGACGT GCGCGCCGAT CCGGCGCTGA ACGACGTGCG GGTGCTCTTG
ATGACCGCGC GCGGCTCGGT CGTGGAACGC CGCAAGGGGC TGGCGCTGGG GGCGGACGGC
TTCATCGCCA AGCCCTTCGA GCTGTCCGAG CTGCGCGCGG AACTGGCGCG GCTGCTGGGG
GGACGATGCT GA
 
Protein sequence
MADILVVEDE DNIATALDFL LSRDGHKHRR MATGAGALEE IRASHPDLVL LDVMLPDVSG 
YQIVQDVRAD PALNDVRVLL MTARGSVVER RKGLALGADG FIAKPFELSE LRAELARLLG
GRC